match_expr_methy: Match expression and methylation

In NWPU-903PR/m6AexpressBHM: m6Aexpress-BHM: Predicting m6A regulation of gene expression in multiple-groups context by a Bayesian Hierarchical Mixture model

Match expression and methylation

Description

Match the paired expression and methylation level for each gene.

Usage

match_expr_methy(gene_express_data,gene_methy)

Arguments

gene_express_data	a list containing a matrix with gene expression for each sample in each group and a numeric vector specifying the sequencing depth size factors for each Input samples.
gene_methy	a data.frame containing the candidate genes' methylation for each sample in each group.

Value

It will return a list containing two components:

gene_expr_methy	a data.frame including the matched gene expression and methylation level for each sample in all concerned groups.
size_factor	a numeric vector specifying the sequencing depth size factors for each Input samples of all concerned groups.

Examples

## Not run: 
### Match expression and methylation genes
gene_expr_methy <- match_expr_methy(gene_express_data=gene_expression,                                                     gene_methy=select_methylated_genes)

## End(Not run)

NWPU-903PR/m6AexpressBHM documentation built on May 29, 2022, 11:07 p.m.