Files in NewGraphEnvironment/fish_passage_bulkley_2020_reporting
Does not matter.
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.travis.yml
0040-executive_summary.Rmd
0100-intro.Rmd
0200-background.Rmd
0300-method.Rmd
0400-results.Rmd
0500-recomendations.Rmd
0600-appendix.Rmd
0800-appendix-003139.Rmd
0800-appendix-058159.Rmd
0800-appendix-123445.Rmd
0800-appendix-123794.Rmd
0800-appendix-123795.Rmd
0800-appendix-124487.Rmd
0800-appendix-124500.Rmd
0800-appendix-195290.Rmd
0800-appendix-197360.Rmd
0800-appendix-197640.Rmd
0800-appendix-197658.Rmd
0800-appendix-197662.Rmd
0800-appendix-197663.Rmd
0800-appendix-197665.Rmd
0800-appendix-197667.Rmd
0800-appendix-197668.Rmd
2000-references.Rmd
2090-report-change-log.Rmd
2100-session-info.Rmd
DESCRIPTION
Dockerfile
LICENSE
NEWS.md
R/0100-setup.R
R/0110-photos-backup-resize.R
R/0120-photos-amalgamate-culvert.R
R/0210-extract-rd-tenure.R
R/0215-extract-watershed-codes.R
R/0220-extract-structure-size-type.R
R/0230-extract-photos-for-pscis-submission.R
R/0240-load-bcdata.R
R/0250-load-crossings-xref.R
R/0252-extract-crossings-xref.R
R/0255-load-pscis.R
R/0260-extract-rd-cost-mult.R
R/0270-extract-photos-for-pscis-phase2-submission.R
R/0280-extract-bcfishpass-rd-data-modelled_closed_bottom.R
R/0282-extract-bcfishpass2-crossing-corrections.R
R/0290-extract-bcfishpass-planning.R
R/0291-extract-bcfishpass-spawn-rear-model.R
R/0293-extract-bcfishpass-planning-morice.R
R/0310-tables.R
R/0315-tables-bcfishpass.R
R/0320-tables-phase2.R
R/0330-tables-phase1-cost-estimate.R
R/0340-tables-phase2-cost-estimate.R
R/0350-tables-reporting.R
R/0355-tables-reporting-html.R
R/0360-extract-utms-pscis-to-hab-con.R
R/0370-extract-utms-gpx-to-hab-con.R
R/0380-extract-fish-to-hab-con-density-summary.R
R/0410-analyze_fish.R
R/0412-analyze_fish_morice.R
R/0420-report-hydrometric.R
R/0430-report-fish_gantt.R
R/0500-download-field-maps.R
R/channel_width_modelling.R
R/explore-dbs.R
R/extract-fiss-species-table.R
R/extract-pg.R
R/functions-fish.R
R/functions-phase2.R
R/functions.R
R/load-obstacles-xref.R
R/outgoing-mapping.R
R/packages.R
R/photos-build-logo-combined.R
R/photos-extract-metadata.R
R/run.R
R/tables_2023.R
R/test-fiss_obstacles_pnt_sp.R
README.md
_bookdown.yml
_build.sh
_deploy.sh
_output.yml
book.bib
bulkley-reporting.Rproj
data/2023/habitat_confirmations.xls
data/2023/photos/124500/TimePhoto_20230915_154109_k_fish1.JPG
data/2023/photos/124500/TimePhoto_20230915_161854_k_fish2.JPG
data/2023/photos/124500/crossing_all.JPG
data/2023/photos/197360/IMG_2260_k_fish1.JPG
data/2023/photos/197360/TimePhoto_20230913_151539_197360_ds_ef1_typical_1_k_.JPG
data/2023/photos/197360/TimePhoto_20230913_160052_197360_us_ef1_typical_2_k_.JPG
data/2023/photos/197640/crossing_all.JPG
data/Attachment_1_morice_planning_kml.zip
data/bcfishpass.sqlite
data/extracted_inputs/bcfishpass.csv
data/extracted_inputs/bcfishpass2.csv
data/extracted_inputs/fiss_obstacle_qa.csv
data/extracted_inputs/fiss_species_table.csv
data/extracted_inputs/fiss_sum.csv
data/extracted_inputs/fiss_sum_grad.csv
data/extracted_inputs/fiss_sum_width.csv
data/extracted_inputs/hab_con_fish_summary.csv
data/extracted_inputs/hab_con_wsc_codes.csv
data/extracted_inputs/hab_site_corrected.csv
data/extracted_inputs/planning_results.csv
data/extracted_inputs/pscis1_rd_tenure.csv
data/extracted_inputs/pscis1_str_type.csv
data/extracted_inputs/pscis2_str_type.csv
data/extracted_inputs/pscis_phase2_rd_tenure.csv
data/extracted_inputs/pscis_rd.csv
data/extracted_inputs/pscis_rd2.csv
data/extracted_inputs/pscis_reassessmeents_rd_tenure.csv
data/extracted_inputs/pscis_reassessments_str_type.csv
data/extracted_inputs/tab_cost_rd_mult.csv
data/extracted_inputs/utm_inputs.csv
data/extracted_inputs/utm_inputs_wp.csv
data/extracted_inputs/wshds.kml
data/extracted_inputs/xref_pscis_my_crossing_modelled.csv
data/fishpass_mapping/fishpass_mapping.gpkg
data/fishpass_mapping/hab_features.geojson
data/fishpass_mapping/hab_fish_collect.geojson
data/fishpass_mapping/hab_site_priorities.geojson
data/fishpass_mapping/hab_tracks.geojson
data/fishpass_mapping/hab_wshds.geojson
data/fishpass_mapping/phase1_priorities.geojson
data/fishpass_mapping/wshd_study_areas.geojson
data/habitat_confirmation_tracks.gpx
data/habitat_confirmations.xls
data/habitat_confirmations_priorities.csv
data/inputs_raw/field_2020_al.gpx
data/inputs_raw/field_2020_kyle.GPX
data/inputs_raw/fish_species_life_history_gantt.csv
data/inputs_raw/hab_con_ef_time.xlsx
data/outputs_uav/gibson195288202020210120.kmz
data/outputs_uav/gibson195290202020210121.kmz
data/outputs_uav/riddeck202020210118.kmz
data/photo_metadata.csv
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data/pscis_phase1.xlsm
data/pscis_phase2.xlsm
data/pscis_reassessments.xlsm
data/release_notes.txt
data/session_info.csv
data/width_modelling/channel_width_measured.csv
data/width_modelling/channel_width_measured_analyze.csv
data/width_modelling/model_spawning_rearing_habitat.csv
data/width_modelling/model_spawning_rearing_habitat_ref.csv
data/width_modelling/spawn_rear_thresholds.csv
debug.log
default-page-custom.css
docs/404.html
docs/Attachment_3_Phase_1_Data_and_Photos.pdf
docs/Bulkley.pdf
docs/Bulkley_files/figure-html/fig-sub-1.png
docs/Bulkley_files/figure-html/fig-sub-2.png
docs/Bulkley_files/figure-html/fish-gantt-morice-1.png
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docs/appendix---123445-123446---tyhee-creek.html
docs/appendix---123794---tributary-to-blunt-creek.html
docs/appendix---123795---tributary-to-blunt-creek.html
docs/appendix---124487---porphyryr-creek.html
docs/appendix---124500---helps-creek.html
docs/appendix---195290-195288---gibson-creek.html
docs/appendix---197360---riddeck-creek.html
docs/appendix---197640---tributary-to-buck-creek.html
docs/appendix---197658---byman-creek.html
docs/appendix---197662---richfield-creek.html
docs/appendix---197663-3054---johnny-david-creek.html
docs/appendix---197665-197664-3042---barren-creek.html
docs/appendix---197667-124501---moan-creek.html
docs/appendix---197668-124504---coffin-creek.html
docs/appendix---3139---trib-to-mcquarrie-creek.html
docs/appendix---58159---mcdowell-creek.html
docs/appendix---phase-1-fish-passage-assessment-data-and-photos.html
docs/background.html
docs/changelog.html
docs/channel-width-21.html
docs/channel-width-21.pdf
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