group_jobs_bash: Creating a shell script that submits a whole collection of...

Description Usage Arguments

View source: R/group_jobs_bash.R

Description

Creating a shell script that submits a whole collection of Jobs for job files that match a given pattern and well range

Usage

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group_jobs_bash(path_base, name, letter_row_interval, number_col_interval,
  python_call = "python ~/Distributed-CellProfiler/run.py submitJob ")

Arguments

path_base

the path to the directory containing the job files

letter_row_interval

a vector of the form "c(1:3)" that will be translated to row letters

number_col_interval

a vector of the form "c(1:3)" that will be translated to col numbers

python_call

a python call that will be created

pattern

a string that has to be contained in the job files of interest


NiklasTR/dcp_helper documentation built on June 12, 2020, 10:22 p.m.