Description Usage Arguments Examples
Clustering patients based on the disease
1 | analysis_cluster(input, clusterSubject, Model, clustermax, itermax, mc)
|
input |
the dataframe having patientd ID and phenotype information |
clusterSubject |
A vector of phenotypes or ICD-9 codes of disease of interest that is used to cluster the patients |
Model |
What Cluster model you are selecting!For example Model=Patients will cluster the patients based on different phenotypes |
clustermax |
Maximum threshold of number of clusters that is defined for mode-based cluster function |
itermax |
Maximum number of iteration to analysis |
mc |
number of cores for cluster Analysis |
1 2 3 4 5 6 7 | example1 <- analysis_cluster (
input =ASDGI patients,
clusterSubject =Gastrointestinal phenotypes,
clustermax =5,
itermax =200,
mc =2,
Model =Phenotype)
|
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