SubgroupManager: Subgroup module creates derived variables based on numeric...

In Novartis/subpat: Subpopulation and subgroups shiny modules

Description

Subgroup module creates derived variables based on numeric variables.

Subgroup module creates derived variables based on numeric variables.

Format

R6 class

Input

data

A data set (data frame, tibble, etc.) to create subgroups from.

mapping

A mapping (reactive list) for 'parameter', and 'parameter_value' variables

parameter

The parameter values (PARAM). If this is provided then parameter_value must be provided as well. Will only perform the analysis where parameter == parameter_value

parameter_value

See the description for parameter

options

The options for the module of type reactiveValues with values

showLabels

Boolean: Do you want the variable labels to show? Generally from haven::read_sas or Hmisc::labels

isvar

Boolean: should we show the id variable selector?

Output

subgroups

List of each of the subgroups. Can call as.data.frame on the returned subgroups to create a data frame

Super class

tidymodules::TidyModule -> SubgroupManager

Methods

Public methods

• SubgroupManager$new()

• SubgroupManager$ui()

• SubgroupManager$server()

• SubgroupManager$clone()

Inherited methods

• tidymodules::TidyModule$addInputPort()

• tidymodules::TidyModule$addOutputPort()

• tidymodules::TidyModule$assignPort()

• tidymodules::TidyModule$callModule()

• tidymodules::TidyModule$countInputPort()

• tidymodules::TidyModule$countOutputPort()

• tidymodules::TidyModule$deepClone()

• tidymodules::TidyModule$definePort()

• tidymodules::TidyModule$doServer()

• tidymodules::TidyModule$execInput()

• tidymodules::TidyModule$execOutput()

• tidymodules::TidyModule$getGlobalSession()

• tidymodules::TidyModule$getInput()

• tidymodules::TidyModule$getInputPort()

• tidymodules::TidyModule$getInputPorts()

• tidymodules::TidyModule$getOutput()

• tidymodules::TidyModule$getOutputPort()

• tidymodules::TidyModule$getOutputPorts()

• tidymodules::TidyModule$getPortDef()

• tidymodules::TidyModule$getPortName()

• tidymodules::TidyModule$getSession()

• tidymodules::TidyModule$getSessionId()

• tidymodules::TidyModule$getShinyInput()

• tidymodules::TidyModule$getShinyOutput()

• tidymodules::TidyModule$getShinySession()

• tidymodules::TidyModule$getStore()

• tidymodules::TidyModule$iport()

• tidymodules::TidyModule$isGlobal()

• tidymodules::TidyModule$isStored()

• tidymodules::TidyModule$ns()

• tidymodules::TidyModule$oport()

• tidymodules::TidyModule$print()

• tidymodules::TidyModule$render()

• tidymodules::TidyModule$reset()

• tidymodules::TidyModule$updateInputPort()

• tidymodules::TidyModule$updateInputPorts()

• tidymodules::TidyModule$updateOutputPort()

• tidymodules::TidyModule$updateOutputPorts()

• tidymodules::TidyModule$use()

---

Method new()

Usage

SubgroupManager$new(...)

---

Method ui()

Usage

SubgroupManager$ui()

---

Method server()

Usage

SubgroupManager$server(input, output, session)

---

Method clone()

The objects of this class are cloneable with this method.

Usage

SubgroupManager$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

See Also

Other tidymodules: Filter, Subgroup, SubpopulationManager, Subpopulation, TTEMapping, TTE, TableListing, VariableSelection

Examples

## Not run: 
library(shiny)
library(subpat)
library(bs4Dash)
library(tidymodules)

subgroupManagerModule <- SubgroupManager$new()

ui <- tagList(
  shinyjs::useShinyjs(),
  bs4DashPage(
    sidebar = bs4DashSidebar(disable = TRUE),
    
    body = bs4DashBody(
      subgroupManagerModule$ui(),
      verbatimTextOutput('subgroupSummary')
    )
  )
)

server <- function(input, output, session) {
  
  subgroupManagerModule$callModule()
  
  observe({
    reactive(mtcars) %>1% subgroupManagerModule
  })
  
  output$subgroupSummary <- renderPrint({
    print("Subgroups:")
    print(summary(subgroupManagerModule$getOutput("subgroups")()))
  })
}


## End(Not run)

Novartis/subpat documentation built on April 11, 2020, 3:11 p.m.