Files in OHDSI/Achilles
Achilles Data Source Characterization

.Rbuildignore

.gitattributes

.github/ISSUE_TEMPLATE/bug_report.md

.github/workflows/R_CMD_check_Hades.yaml

.github/workflows/R_CMD_check_main_weekly.yaml

.gitignore

.project

Achilles.Rproj

CRAN-SUBMISSION

DESCRIPTION

NAMESPACE

NEWS.md R/Achilles-package.R R/Achilles.R R/createTimeSeries.r R/exportToAres.R R/exportToCSV.R R/exportToJson.R R/generateDomainOverlapSql.R R/getSeasonalityScore.r R/getTemporalData.r R/isStationary.r R/listMissingAnalyses.r R/performTemporalCharacterization.r R/runMissingAnalyses.r R/sumAcrossYears.r R/tsCompleteYears.r README.md

_pkgdown.yml

compare_versions

cran-comments.md

deploy.sh

docs/404.html

docs/ISSUE_TEMPLATE.html

docs/_config.yml

docs/articles/GettingStarted.html

docs/articles/GettingStarted_files/header-attrs-2.10/header-attrs.js

docs/articles/RunningAchilles.html

docs/articles/RunningAchilles_files/header-attrs-2.10/header-attrs.js

docs/articles/RunningAchilles_files/header-attrs-2.6/header-attrs.js

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Rplot001.png

docs/reference/achilles.html

docs/reference/achillesHeel.html

docs/reference/addDataSource.html

docs/reference/createIndices.html

docs/reference/createTimeSeries.html

docs/reference/dropAllScratchTables.html

docs/reference/exportAO.html

docs/reference/exportConditionEraToJson.html

docs/reference/exportConditionToJson.html

docs/reference/exportDashboardToJson.html

docs/reference/exportDataDensityToJson.html

docs/reference/exportDeathToJson.html

docs/reference/exportDrugEraToJson.html

docs/reference/exportDrugToJson.html

docs/reference/exportHeelToJson.html

docs/reference/exportMeasurementToJson.html

docs/reference/exportMetaToJson.html

docs/reference/exportObservationPeriodToJson.html

docs/reference/exportObservationToJson.html

docs/reference/exportPerformanceToJson.html

docs/reference/exportPersonToJson.html

docs/reference/exportProcedureToJson.html

docs/reference/exportResultsToCSV.html

docs/reference/exportToAres.html

docs/reference/exportToJson.html

docs/reference/exportVisitDetailToJson.html

docs/reference/exportVisitToJson.html

docs/reference/fetchAchillesAnalysisResults.html

docs/reference/fetchAchillesHeelResults.html

docs/reference/generateDbSummary.html

docs/reference/getAnalysisDetails.html

docs/reference/getSeasonalityScore.html

docs/reference/getTemporalData.html

docs/reference/index.html

docs/reference/isStationary.html

docs/reference/launchHeelResultsViewer.html

docs/reference/listMissingAnalyses.html

docs/reference/optimizeAtlasCache.html

docs/reference/performTemporalCharacterization.html

docs/reference/runMissingAnalyses.html

docs/reference/showReportTypes.html

docs/reference/sumAcrossYears.html

docs/reference/tsCompleteYears.html

docs/reference/validateSchema.html

docs/sitemap.xml

extras/Achilles.pdf extras/GenerateDatabaseSummary.R extras/PackageMaintenance.R

extras/achilles_cost_columns.txt

extras/iterativeAchillesProcessing.r

extras/notes.html

extras/notes.md

inst/csv/achilles/achilles_analysis_details.csv

inst/csv/export/all_reports.csv

inst/csv/post_processing/indices.csv

inst/csv/schemas/schema_achilles_results.csv

inst/csv/schemas/schema_achilles_results_concept_count.csv

inst/csv/schemas/schema_achilles_results_dist.csv

inst/sql/sql_server/analyses/0.sql

inst/sql/sql_server/analyses/1.sql

inst/sql/sql_server/analyses/10.sql

inst/sql/sql_server/analyses/1000.sql

inst/sql/sql_server/analyses/1001.sql

inst/sql/sql_server/analyses/1002.sql

inst/sql/sql_server/analyses/1003.sql

inst/sql/sql_server/analyses/1004.sql

inst/sql/sql_server/analyses/1006.sql

inst/sql/sql_server/analyses/1007.sql

inst/sql/sql_server/analyses/1008.sql

inst/sql/sql_server/analyses/101.sql

inst/sql/sql_server/analyses/1010.sql

inst/sql/sql_server/analyses/1011.sql

inst/sql/sql_server/analyses/102.sql

inst/sql/sql_server/analyses/1020.sql

inst/sql/sql_server/analyses/103.sql

inst/sql/sql_server/analyses/1030.sql

inst/sql/sql_server/analyses/1031.sql

inst/sql/sql_server/analyses/1032.sql

inst/sql/sql_server/analyses/104.sql

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inst/sql/sql_server/analyses/1102.sql

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inst/sql/sql_server/analyses/931.sql

inst/sql/sql_server/analyses/932.sql

inst/sql/sql_server/analyses/achilles_analysis_ddl.sql

inst/sql/sql_server/analyses/cost_distribution_template.sql

inst/sql/sql_server/analyses/create_analysis_table.sql

inst/sql/sql_server/analyses/create_result_concept_table.sql

inst/sql/sql_server/analyses/merge_achilles_tables.sql

inst/sql/sql_server/analyses/raw_cost_template.sql

inst/sql/sql_server/export/condition/sqlAgeAtFirstDiagnosis.sql

inst/sql/sql_server/export/condition/sqlConditionTable.sql

inst/sql/sql_server/export/condition/sqlConditionTreemap.sql

inst/sql/sql_server/export/condition/sqlConditionsByType.sql

inst/sql/sql_server/export/condition/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/condition/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/conditionera/sqlAgeAtFirstDiagnosis.sql

inst/sql/sql_server/export/conditionera/sqlConditionEraTable.sql

inst/sql/sql_server/export/conditionera/sqlConditionEraTreemap.sql

inst/sql/sql_server/export/conditionera/sqlLengthOfEra.sql

inst/sql/sql_server/export/conditionera/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/conditionera/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/datadensity/conceptsperperson.sql

inst/sql/sql_server/export/datadensity/domainsperperson.sql

inst/sql/sql_server/export/datadensity/recordsperperson.sql

inst/sql/sql_server/export/datadensity/totalrecords.sql

inst/sql/sql_server/export/death/sqlAgeAtDeath.sql

inst/sql/sql_server/export/death/sqlDeathByType.sql

inst/sql/sql_server/export/death/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/death/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/device/sqlAgeAtFirstExposure.sql

inst/sql/sql_server/export/device/sqlDeviceTable.sql

inst/sql/sql_server/export/device/sqlDevicesByType.sql

inst/sql/sql_server/export/device/sqlFrequencyDistribution.sql

inst/sql/sql_server/export/device/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/device/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/drug/sqlAgeAtFirstExposure.sql

inst/sql/sql_server/export/drug/sqlDaysSupplyDistribution.sql

inst/sql/sql_server/export/drug/sqlDomainDrugStratification.sql

inst/sql/sql_server/export/drug/sqlDrugTable.sql

inst/sql/sql_server/export/drug/sqlDrugTreemap.sql

inst/sql/sql_server/export/drug/sqlDrugsByType.sql

inst/sql/sql_server/export/drug/sqlFrequencyDistribution.sql

inst/sql/sql_server/export/drug/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/drug/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/drug/sqlQuantityDistribution.sql

inst/sql/sql_server/export/drug/sqlRefillsDistribution.sql

inst/sql/sql_server/export/drugera/sqlAgeAtFirstExposure.sql

inst/sql/sql_server/export/drugera/sqlDrugEraTable.sql

inst/sql/sql_server/export/drugera/sqlDrugEraTreemap.sql

inst/sql/sql_server/export/drugera/sqlLengthOfEra.sql

inst/sql/sql_server/export/drugera/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/drugera/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/measurement/sqlAgeAtFirstOccurrence.sql

inst/sql/sql_server/export/measurement/sqlFrequencyDistribution.sql

inst/sql/sql_server/export/measurement/sqlLowerLimitDistribution.sql

inst/sql/sql_server/export/measurement/sqlMeasurementTable.sql

inst/sql/sql_server/export/measurement/sqlMeasurementTreemap.sql

inst/sql/sql_server/export/measurement/sqlMeasurementValueDistribution.sql

inst/sql/sql_server/export/measurement/sqlMeasurementsByType.sql

inst/sql/sql_server/export/measurement/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/measurement/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/measurement/sqlRecordsByUnit.sql

inst/sql/sql_server/export/measurement/sqlUpperLimitDistribution.sql

inst/sql/sql_server/export/measurement/sqlValuesRelativeToNorm.sql

inst/sql/sql_server/export/metadata/sqlCdmSource.sql

inst/sql/sql_server/export/metadata/sqlMetadata.sql

inst/sql/sql_server/export/observation/sqlAgeAtFirstOccurrence.sql

inst/sql/sql_server/export/observation/sqlFrequencyDistribution.sql

inst/sql/sql_server/export/observation/sqlObservationTable.sql

inst/sql/sql_server/export/observation/sqlObservationTreemap.sql

inst/sql/sql_server/export/observation/sqlObservationsByType.sql

inst/sql/sql_server/export/observation/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/observation/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/observationperiod/ageatfirst.sql

inst/sql/sql_server/export/observationperiod/agebygender.sql

inst/sql/sql_server/export/observationperiod/cumulativeduration.sql

inst/sql/sql_server/export/observationperiod/observationlength_data.sql

inst/sql/sql_server/export/observationperiod/observationlength_stats.sql

inst/sql/sql_server/export/observationperiod/observationlengthbyage.sql

inst/sql/sql_server/export/observationperiod/observationlengthbygender.sql

inst/sql/sql_server/export/observationperiod/observedbymonth.sql

inst/sql/sql_server/export/observationperiod/observedbyyear_data.sql

inst/sql/sql_server/export/observationperiod/observedbyyear_stats.sql

inst/sql/sql_server/export/observationperiod/periodsperperson.sql

inst/sql/sql_server/export/performance/sqlAchillesPerformance.sql

inst/sql/sql_server/export/person/ethnicity.sql

inst/sql/sql_server/export/person/gender.sql

inst/sql/sql_server/export/person/population.sql

inst/sql/sql_server/export/person/population_age_gender.sql

inst/sql/sql_server/export/person/race.sql

inst/sql/sql_server/export/person/yearofbirth.sql

inst/sql/sql_server/export/person/yearofbirth_data.sql

inst/sql/sql_server/export/person/yearofbirth_stats.sql

inst/sql/sql_server/export/procedure/sqlAgeAtFirstOccurrence.sql

inst/sql/sql_server/export/procedure/sqlFrequencyDistribution.sql

inst/sql/sql_server/export/procedure/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/procedure/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/procedure/sqlProcedureTable.sql

inst/sql/sql_server/export/procedure/sqlProcedureTreemap.sql

inst/sql/sql_server/export/procedure/sqlProceduresByType.sql

inst/sql/sql_server/export/provider/sqlProviderSpecialty.sql

inst/sql/sql_server/export/quality/sqlCompletenessTable.sql

inst/sql/sql_server/export/raw/export_raw_achilles_results.sql

inst/sql/sql_server/export/visit/sqlAgeAtFirstOccurrence.sql

inst/sql/sql_server/export/visit/sqlDomainVisitStratification.sql

inst/sql/sql_server/export/visit/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/visit/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/visit/sqlVisitDurationByType.sql

inst/sql/sql_server/export/visit/sqlVisitTreemap.sql

inst/sql/sql_server/export/visit/sqlVisitTreemapAO.sql

inst/sql/sql_server/export/visitdetail/sqlAgeAtFirstOccurrence.sql

inst/sql/sql_server/export/visitdetail/sqlDomainVisitDetailStratification.sql

inst/sql/sql_server/export/visitdetail/sqlPrevalenceByGenderAgeYear.sql

inst/sql/sql_server/export/visitdetail/sqlPrevalenceByMonth.sql

inst/sql/sql_server/export/visitdetail/sqlVisitDetailDurationByType.sql

inst/sql/sql_server/export/visitdetail/sqlVisitDetailTreemap.sql

inst/sql/sql_server/export/visitdetail/sqlVisitDetailTreemapAO.sql

inst/sql/sql_server/summary/dbSourceVocabs.sql

inst/sql/sql_server/summary/dbVisitDist.sql

inst/sql/sql_server/summary/generateDbSummary.sql

inst/sql/sql_server/temporal/achilles_temporal_data.sql

vignettes/.gitignore

vignettes/GettingStarted.Rmd vignettes/RunningAchilles.R vignettes/RunningAchilles.Rmd

OHDSI/Achilles documentation built on Oct. 13, 2023, 7:45 a.m.

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OHDSI/Achilles
Achilles Data Source Characterization

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Achilles Data Source Characterization

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OHDSI/Achilles Achilles Data Source Characterization

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OHDSI/Achilles
Achilles Data Source Characterization

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Achilles Data Source Characterization