addControlsToStudyPackage: Add controls to a SkeletonComparativeEffectStudy package

In OHDSI/CemConnector: OHDSI Common Evidence Model (CEM) Connector

Add controls to a SkeletonComparativeEffectStudy package

Description

See https:://github.com/ohdsi/SkeletonComparativeEffectStudy for details on creating a study This function adds a set of negative controls to the study package to be automatically instantiated as cohorts. Id's are determined by the study package, normally this is the same as the concept id

Usage

addControlsToStudyPackage(
  controlConcepts,
  targetId,
  comparatorId = NULL,
  fileName = "inst/settings/NegativeControls.csv",
  type = "outcome"
)

Arguments

controlConcepts	data.frame with at least 1 row (recommended > 10) containing conceptId and conceptName
targetId	target cohort Id controls are for
comparatorId	comparator cohort Id controls are for (optional in self controlled studies)
fileName	path of existing negative control file or where file will be written
type	"outcome" or "exposure" - only outcomes are currently supported by the study package

OHDSI/CemConnector documentation built on Aug. 5, 2023, 2:47 p.m.