createAllLookupTables: Run the query to create all lookup table.

In OHDSI/ETL-HealthVerityBuilder: A Builder for Converting the HealthVerity Data Model to the OMOP CDM

Description

This function will call and run the sql files to create the lookup tables. If parameter sqlFileList is left blank, the default will call LocationTable.sql, CareSiteTable.sql, PersonTable.sql and ProviderTable.sql

Usage

createAllLookupTables(connectionDetails, cdmDatabaseSchema,
  sourceDatabaseSchema, sqlFileList = NULL, oracleTempSchema = NULL)

Arguments

connectionDetails	An R object of type connectionDetails created using the function createConnectionDetails in the DatabaseConnector package.
cdmDatabaseSchema	The name of the database schema that contains the OMOP CDM instance. Requires read permissions to this database. On SQL Server, this should specifiy both the database and the schema, so for example 'cdm_instance.dbo'.
sourceDatabaseSchema	The name of the database schema that contains the raw data instance. Requires read permissions to this database. On SQL Server, this should specifiy both the database and the schema, so for example 'raw_instance.dbo'.
sqlFileList	The list of the sql files for the lookup tables containing the sql to run. For example list("LocationTable.sql","PersonTable.sql")
oracleTempSchema	For Oracle only: the name of the database schema where you want all temporary tables to be managed. Requires create/insert permissions to this database.

OHDSI/ETL-HealthVerityBuilder documentation built on May 19, 2019, 12:40 a.m.