MCMCtrace: Get MCMC traces for LCMCR

In OlivierBinette/MSETools: Interface to Multiple Systems Estimation Software

Get MCMC traces for LCMCR

Description

Return MCMC traces for the "n0", "prob_zero" and "k_star" parameters of LCMCR objects. For each of these parameters, a matrix is returned where each row represents an iteration and each column a chain.

Run MCMC and return traces for the "n0", "prob_zero" and "k_star" parameters of LCMCR objects. For each of these parameters, a matrix is returned where each row represents an iteration and each column a chain.

Usage

MCMCtraces(fit, burnin = 0, nSamples = 100, thinning = 1000, mc.cores=detectCores())

MCMCtraces(fit, burnin = 0, nSamples = 100, thinning = 1000, mc.cores=detectCores())

Arguments

fit	object of class "lcmcr".
burnin	number of burn-in iterations.
nSamples	number of samples to be returned.
thinning	number of iterations between each sample.
mc.cores	number of cores to use for computation.

OlivierBinette/MSETools documentation built on Aug. 7, 2022, 8:42 p.m.