Files in Osmahmoud/SlopeHunter
Slope-Hunter: A ROBUST METHOD FOR COLLIDER BIAS CORRECTION IN CONDITIONAL GENOME-WIDE ASSOCIATION STUDIES
.Rbuildignore
.Rprofile
.gitattributes
.gitignore
Build_software.R
DESCRIPTION
NAMESPACE
R/LD_prune.R
R/SH-utils.R
R/SHadj.R
R/StartupLoadingMessage.R
R/data_example.R
R/format_data.R
R/harmonise_effects.R
R/hunt.R
R/read_incidence.R
R/read_prognosis.R
README.md
SlopeHunter.Rproj
_workflowr.yml
analysis/Tut_BCa.Rmd
analysis/_site.yml
analysis/about.Rmd
analysis/index.Rmd
analysis/license.Rmd
analysis/sh.bib
analysis/tutorial.Rmd
code/README.md
data-workflowr/README.md
data/data_example.rda
docs/.nojekyll
docs/about.html
docs/index.html
docs/license.html
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.css.map
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.min.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap.css.map
docs/site_libs/bootstrap-3.3.5/css/bootstrap.min.css
docs/site_libs/bootstrap-3.3.5/css/cerulean.min.css
docs/site_libs/bootstrap-3.3.5/css/cosmo.min.css
docs/site_libs/bootstrap-3.3.5/css/darkly.min.css
docs/site_libs/bootstrap-3.3.5/css/flatly.min.css
docs/site_libs/bootstrap-3.3.5/css/fonts/Lato.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/LatoBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/LatoItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/NewsCycle.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/NewsCycleBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSans.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansBoldItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansLightItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Raleway.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RalewayBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Roboto.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoLight.ttf
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docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansPro.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Ubuntu.ttf
docs/site_libs/bootstrap-3.3.5/css/journal.min.css
docs/site_libs/bootstrap-3.3.5/css/lumen.min.css
docs/site_libs/bootstrap-3.3.5/css/paper.min.css
docs/site_libs/bootstrap-3.3.5/css/readable.min.css
docs/site_libs/bootstrap-3.3.5/css/sandstone.min.css
docs/site_libs/bootstrap-3.3.5/css/simplex.min.css
docs/site_libs/bootstrap-3.3.5/css/spacelab.min.css
docs/site_libs/bootstrap-3.3.5/css/united.min.css
docs/site_libs/bootstrap-3.3.5/css/yeti.min.css
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.eot
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.svg
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.ttf
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff2
docs/site_libs/bootstrap-3.3.5/js/bootstrap.js
docs/site_libs/bootstrap-3.3.5/js/bootstrap.min.js
docs/site_libs/bootstrap-3.3.5/js/npm.js
docs/site_libs/bootstrap-3.3.5/shim/html5shiv.min.js
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docs/site_libs/font-awesome-5.1.0/css/all.css
docs/site_libs/font-awesome-5.1.0/css/v4-shims.css
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docs/site_libs/header-attrs-2.13/header-attrs.js
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docs/site_libs/highlightjs-9.12.0/default.css
docs/site_libs/highlightjs-9.12.0/highlight.js
docs/site_libs/highlightjs-9.12.0/textmate.css
docs/site_libs/jquery-1.11.3/jquery.min.js
docs/site_libs/jquery-3.6.0/jquery-3.6.0.js
docs/site_libs/jquery-3.6.0/jquery-3.6.0.min.js
docs/site_libs/jquery-3.6.0/jquery-3.6.0.min.map
docs/site_libs/jqueryui-1.11.4/README
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docs/site_libs/jqueryui-1.11.4/index.html
docs/site_libs/jqueryui-1.11.4/jquery-ui.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.js
docs/site_libs/jqueryui-1.11.4/jquery-ui.min.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.min.js
docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.min.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.min.css
docs/site_libs/navigation-1.1/codefolding-lua.css
docs/site_libs/navigation-1.1/codefolding.js
docs/site_libs/navigation-1.1/sourceembed.js
docs/site_libs/navigation-1.1/tabsets.js
docs/site_libs/tocify-1.9.1/jquery.tocify.css
docs/site_libs/tocify-1.9.1/jquery.tocify.js
docs/tutorial.html
inst/CITATION
man/LD_prune.Rd
man/SHadj.Rd
man/data_example.Rd
man/download_plink.Rd
man/format_data.Rd
man/harmonise_effects.Rd
man/hunt.Rd
man/ld_local.Rd
man/plot.SH.Rd
man/read_incidence.Rd
man/read_prognosis.Rd
man/shclust.Rd
output/README.md
