start_project: Start specific projects

In OuhscBbmc/pluripotent: Generate an embryonic repository

Start specific projects

Description

start_r_analysis_skeleton() copies the files to the destination_directory on your local maachine.

Usage

start_r_analysis_skeleton(
  project_name  = "new-project-analysis",
  destination_directory = "~/analysis"
)
start_cdw_skeleton_1(
  project_name  = "new-project-cdw",
  destination_directory = "~/cdw"
)
start_neonatology_1(
  project_name  = "new-project-neonatology",
  destination_directory = "~/neonatology"
)

Arguments

project_name	character of the new project. Defaults to new-project.
destination_directory	character of the files. Defaults to ~ (i.e, the home directory).

Details

Currently, three types of project are supported:

1. r-analysis-skeleton

2. cdw-sekeleton-1

3. start_neonatology_1

Note

To view the files involved in each project type, refer to https://github.com/OuhscBbmc/pluripotent/inst/data/file-to-copy.csv. Each line represents one file that will be placed in the new project. The columns are

1. offspring: the project type to be created.

2. destination: the file's location in the new project.

3. source: the location where the file is copied from.

Author(s)

Will Beasley

Examples

library(pluripotent)

## Not run: 
start_r_analysis_skeleton("new-project", "./data-public/testing")
start_cdw_skeleton_1()
start_cdw_skeleton_1("thumann-awesomeness-4")
start_neonatology_1("deshea-awesomeness-4")

## End(Not run)

OuhscBbmc/pluripotent documentation built on Oct. 10, 2024, 7:32 a.m.