tab_covariate_coefs: Tabulate coefficients associated with covariates

In OxWearables/epicoda: Supports epidemiological analyses using compositional exposure variables

Tabulate coefficients associated with covariates

Description

This pulls out a table of the coefficients of the covariates only in the model. Confidence intervals are calculated using 'confint'. The function may fail for logistic regression if the MASS package is not installed.

Usage

tab_covariate_coefs(
  model = NULL,
  scale_type = "lp",
  level = 0.95,
  comp_labels,
  part_1 = NULL
)

Arguments

model	Model for which extracting coefficients.
scale_type	Can take value "lp" (linear predictors) or "exp" (exponentiated- relevant for interpretation of logistic and Cox models).
level	The level argument of the confidence intervals. Passed directly to 'stats::confint'.
comp_labels	The labels of the compositional columns.
part_1	Used with ilr-pivot coordinate transformation to specify which should be first part. Passed to alter_order_comp_labels unless NULL.

Value

Table of covariates and their associated coefficients (parameter value with lower and upper confidence interval). Note that, unlike the plotting and some other default model summary functions in R, this uses confidence intervals based on stats::confint.

OxWearables/epicoda documentation built on Dec. 7, 2022, 9:07 p.m.