AIC | calculate AIC from a likelihood function optimization... |
AICc | calculate AICc from a likelihood function optimization... |
akaike_predict | testing : us Akaike weights to predict across a series of... |
akaike_weight_predictions | testing : accepts a list of akaike predictions (as returned... |
akaike_weights | calculate Akaike weights from a vector of AIC values |
BIC | calculated BIC from a likelihood function optimization... |
binary_reclassify | preform a binary reclassification on an input raster, with... |
birdcode_fieldname | hidden function that greps for four-letter-codes |
buffer_grid_unit | generate a square buffer around a single input feature |
build_unmarked_distance_df | accepts a named raster stack of covariates, an IMBCR... |
build_unmarked_gds | accepts a formatted IMBCR SpatialPointsDataFrame and builds... |
calc_day_of_year | calculate day-of-year for a given IMBCR spatial data.frame |
calc_dist_bins | accepts a Spatial*DataFrame object with a distance... |
calc_interpatch_distance | hidden function that will calculate interpatch distance using... |
calc_k | estimates a K parameter (upper-bound of integration) as a... |
calc_lat_lon | calculate the latitude and longitude of feature centroids in... |
calc_mean | shorthand mean calculation function |
calc_mean_patch_area | hidden function that will use SDMTools to calculate the mean... |
calc_patch_count | hidden function that will use SDMTools to calculate the... |
calc_route_centroids | hidden function that calculates route centroids and attribute... |
calc_time_of_day | calculate time-of-day for a given IMBCR spatial data.frame |
calc_total_area | shorthand total area calculation function |
calc_transect_effort | calculate transect effort for a given IMBCR spatial... |
commonname_fieldname | hidden function that greps for four-letter-codes |
distance_fieldname | hidden function that greps for the distance field name |
drop_overlapping_units | hidden function that will calculate the centroids of a USNG... |
expit | expit link function |
extract_by | extract an input raster dataset using polygon feature(s).... |
extract_by_large_df | testing: chunk out the task of extracting buffers from a... |
generate_fishnet_grid | generate a uniform fishnet grid for a variable polygon... |
imbcr_df_to_spatial_points | parse a source CSV (published by BCR) for IMBCR data and... |
l_buffer_grid_units | testing: generalization of the buffer_grid_units function... |
l_calc_stat | testing: std lapply implementation to benchmark against... |
logit | logit link function |
mCombinations | testing : hidden function to derive a data.frame of all... |
par_buffer_grid_units | testing: generalization of buffer_grid_unit with parallel... |
par_calc_stat | shorthand function that applies an arbitrary, user-supplied... |
parseLayerDsn | built-in (hidden) function that will accept the full path of... |
partialPredict | build a response plot for a given variable using a fitted... |
par_unmarked_predict | testing: use the parallel package to predict across a large... |
plot_hn_det | plot a half-normal detection function from an unmarked object |
polygon_to_fishnet_grid | will generate a uniform vector grid within a polygon.... |
pool_by_transect_year | hidden function that summarizes imbcr transect covariate data... |
readOGRfromPath | built-in (hidden) function that will accept the full path of... |
recursive_find_file | recursively find all files in folder (root) that match the... |
scrub_imbcr_df | kludging to back-fill any transect stations in an imbcr... |
scrub_unmarked_dataframe | hidden function used to clean-up an unmarked data.frame... |
SE | calculate SE from a likelihood function optimization... |
spatial_join | shorthand vector extraction function that performs a spatial... |
strip_common_name | strip non-essential characters and spaces from a species... |
timeperiod_fieldname | hidden function that greps for the timeperiod field name |
transect_fieldname | hidden function that greps for the transect field name |
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