Man pages for PadiLab/CRANE
Randomly perturbing networks with fixed strength
| adjMatToElist | converts adjacency matrix to edge list |
| alpaca.computeDifferentialScore.fromDWBM | Compute Differential modularity score from differential... |
| alpaca.crane | Find the robust nodes in ALPACA community using CRANE |
| alpaca.getMember | get the member vector from alpaca object |
| alpacaObjectToDfList | Converts alpaca output into list of data frames |
| ang | Angiogenic Ovarian Cancer Network Edge List |
| condor.createObject | creates condor object |
| condor.run | Run CONDOR clustering |
| crane.bipartite | Pertrubs the bipartite network with fixed node strength |
| crane.unipartite | Pertrubs the unipartite network with fixed node strength from... |
| elist.addTags | Adds "_A" to first column and "_B" to second column |
| elist.isEdgeOrderEqual | check if first two columns are identical |
| elist.removeTags | undo elist.addTags |
| elist.sort | Sorts the edge list based on first two columns in... |
| elistToAdjMat | Converts edge list to adjacency matrix |
| isElist | Check if data frame is an edge list |
| jutterDegree | CRANE Beta perturbation function. This function will add... |
| nonAng | Non-Angiogenic Ovarian Cancer Network Edge List |
