| buildSignatureMatrixMAST | Builds a signature matrix from single-cell data by calling... |
| buildSignatureMatrixUsingSeruat | Builds a signature matrix from single-cell data by calling... |
| DEAnalysis | Calculates differentially expressed genes between each cell... |
| DEAnalysisMAST | Calculates differentially expressed genes between each cell... |
| findDampeningConstant | Find a dampening constant for dampened weighted least squares... |
| solveDampenedWLS | Solve overdetermined system of equations, Sx=B, for x, using... |
| solveDampenedWLSj | Solve overdetermined system of equations, Sx=B, for x, using... |
| solveOLS | Solve overdetermined system of equations, Sx=B, for x, using... |
| solveSVR | Solve overdetermined system of equations, Sx=B, for x, using... |
| trimData | Trims bulk data and single-cell signature matrix to contain... |
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