extractDatabase: protein database extraction
In PengyiYang/ReFraction: A machine learning approach for deterministic identification of protein homologues and splice variants in large-scale MS-based proteomics
Description
Usage
Arguments
Value
Description
Extracting protein properties from a given fasta protein database. This information is required by ReFraction.
Usage
1
extractDatabase(database.fasta)
Arguments
database.fasta
A protein database used for peptide identification in fasta format. You need to provide the complete path to this file.
Value
protein.database
A matrix that containing protein properties extracted from protein sequences. This matrix is essential for ReFraction learning.
PengyiYang/ReFraction documentation built on May 14, 2019, 11:01 p.m.
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Description Usage Arguments Value
Description
Extracting protein properties from a given fasta protein database. This information is required by ReFraction.
Usage
1 | extractDatabase(database.fasta)
|
Arguments
database.fasta |
A protein database used for peptide identification in fasta format. You need to provide the complete path to this file. |
Value
protein.database |
A matrix that containing protein properties extracted from protein sequences. This matrix is essential for ReFraction learning. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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