Man pages for PiotrTymoszuk/coxExtensions
Extended Inference and Goodness of Fit for Cox Models
| as_coxex | Create a coxex object model. |
| as_coxph | Convert to a coxph class. |
| brier | Build a brier class object. |
| calc_expected_ | Calculate expected values from normal distribution |
| calibrator | Build a calibration object. |
| count_ | Count levels of a variable |
| coxex | Create a coxex object model. |
| cut_quantiles | Cut vector in n-quantile intervals. |
| formula.coxex | Modeling formula. |
| get_cox_assumptions | Check assumptions fo a CoxPH model. |
| get_cox_calibration | Calculate D'Agostino - Nam calibration stats. |
| get_cox_estimates | Get inference statistic for a CoxPH model. |
| get_cox_pec | Calculate prediction error curves and integrated Brier score... |
| get_cox_qc | Get the extended residual table for a CoxPH model. |
| get_cox_qc_plots | Residuals plots for a CoxPH model. |
| get_cox_stats | Goodness of fit for a CoxPH model. |
| get_cox_validation | Validation statistics for 'coxph' and 'coxex' models. |
| is_brier | Test for the brier class. |
| is_calibrator | Test for the calibrator class. |
| is_coxex | Test for the coxex class. |
| model.frame.coxex | Modeling data. |
| nobs.calibrator | Number of observations and events. |
| nobs.coxex | Number of observations and events. |
| plot.brier | Plot a 'brier' class object. |
| plot.calibrator | Plot the observed and fitted survival for the linear... |
| plot.coxex | Plot a coxex object. |
| plot_cox_fit | Plot outcome and expected survival. |
| plot_squares | Plot squared errors between the outcome and observed... |
| point_plot_ | Generate a customized point plot. |
| predict.coxex | Prediction for the coxex class. |
| print.calibrator | Print a calibrator object. |
| print.coxex | Print a coxex model. |
| residuals.coxex | Extended residuals of a coxex object. |
| sem | Standard error of the mean. |
| summary.calibrator | Statistic summary of the D'Agostino-Nam calibration and... |
| summary.coxex | Summary for the coxex class. |
| surv2df | Convert a survival object to a data frame with censored... |
| surv_brier.coxex | Calculate Brier scores for survival models. |
| validate.coxex | Validate a 'coxex' model. |
