getMotifMatcherHits: get a table of bioconductor (MotifMatcher) hits in the...
In PriceLab/tfBindingSites: assess TF binding site predictions using ChIP-seq
Description
Usage
Arguments
Value
Description
get a table of bioconductor (MotifMatcher) hits in the regions specified in the incoming data.frame
Usage
1
2
3
## S4 method for signature 'tfBindingSites'
getMotifMatcherHits(obj, tbl.regions, pfms,
matchThreshold = 0.7)
Arguments
obj
An object of class tfBindingSites
tbl.regions
a data.frame with (at least) chr, start, end columns
Value
a data.frame
PriceLab/tfBindingSites documentation built on May 9, 2019, 3:29 a.m.
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Description Usage Arguments Value
Description
get a table of bioconductor (MotifMatcher) hits in the regions specified in the incoming data.frame
Usage
1 2 3 | ## S4 method for signature 'tfBindingSites'
getMotifMatcherHits(obj, tbl.regions, pfms,
matchThreshold = 0.7)
|
Arguments
obj |
An object of class tfBindingSites |
tbl.regions |
a data.frame with (at least) chr, start, end columns |
Value
a data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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