heatmap_norm: normalization for heatmap input to obtain better heatmap plot
In PriscillaBai-UTokyo/Priscilla: Priscilla
Description
data: matrix or dataframe with row denotes genes and col denotes samples
method: log2 or log10
probs1: 0.9 or 0.95
probs2: 0.1 or 0.05
Usage
1
heatmap_norm(data,method=log10,probs1=0.90,probs2=0.1)
Examples
1
2
3
data(expr_limma,package='Priscilla')
expr_limma = factor2num(expr_limma,j=1)
expr_limma_1 = heatmap_norm(expr_limma,method=log10,probs1=0.90,probs2=0.1)
PriscillaBai-UTokyo/Priscilla documentation built on March 22, 2020, 2:08 a.m.
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Description
data: matrix or dataframe with row denotes genes and col denotes samples method: log2 or log10 probs1: 0.9 or 0.95 probs2: 0.1 or 0.05
Usage
1 | heatmap_norm(data,method=log10,probs1=0.90,probs2=0.1)
|
Examples
1 2 3 | data(expr_limma,package='Priscilla')
expr_limma = factor2num(expr_limma,j=1)
expr_limma_1 = heatmap_norm(expr_limma,method=log10,probs1=0.90,probs2=0.1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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