README.md

In ProMetIS/LATMX2: Multi-omics phenotyping of the LAT and MX2 knockout mice

The LATMX2 R package: Multi-omics phenotyping of the LAT and MX2 knockout mice

Description

This experiment package provides the data set generated by the proteomics and metabolomics study of the LAT and MX2 knockout mice.

Installation

The package can be installed from github with devtools::install_github("ProMetIS/LATMX2").

Authors

Alyssa Imbert, Florence Castelli, Magali Rompais, Mohammed Selloum, Emmanuelle Mouton-Barbosa, Thomas Burger, Marion Brandolini-Bunlon, Arthur Tenenhaus, Yves Vandenbrouck, Olivier Sand, Pierrick Roger, Natacha Lenuzza, Emeline Chu-Van, Charlotte Joly, Julia Novion Ducassou, Tania Sorg, Bernard Malissen, Ludovic Cottret, Christophe Bruley, Franck Giacomoni, Laurent Vasseur, Aurélie Hirschler, Yohann Couté, Christophe Lechaplais, Marcel Salanoubat, David Bouyssié, Marie Courçon, Odile Schiltz, Fabien Jourdan, Pierre Le Ber, Alain Perret, Virginie Brun, Dominique Rolin, Jérôme Garin, Claudine Médigue, Christophe Junot, David Vallenet, Anne Gonzalez-de-Peredo, Myriam Ferro, Estelle Pujos-Guillot, Yann Herault, Christine Carapito, François Fenaille and Etienne A. Thévenot (ProMetIS consortium)

Experimental design

Consortium

Funding

The ProMetIS project is funded by five French National Infrastructures:

• PHENOMIN: Mouse Phenogenomics [ANR-10-INBS-0007]

• France Genomique [ANR-10-INBS-0009]

• ProFI: Proteomics [ANR-10-INBS-0008]

• MetaboHUB: Metabolomics and Fluxomics [ANR-11-INBS-0010]

• IFB: Bioinformatics [ANR-11-INBS-0013]

In particular, Alyssa Imbert is supported by a post-doctoral fellowship from IFB as part of the pilot projects in integrative bioinformatics.

Citation

Please cite:

The ProMetIS resource for proteomics and metabolomics data analysis and integration (2020). Alyssa Imbert, Florence Castelli, Magali Rompais, Mohammed Selloum, Emmanuelle Mouton-Barbosa, Thomas Burger, Marion Brandolini-Bunlon, Arthur Tenenhaus, Yves Vandenbrouck, Olivier Sand, Pierrick Roger, Natacha Lenuzza, Emeline Chu-Van, Charlotte Joly, Julia Novion Ducassou, Tania Sorg, Bernard Malissen, Ludovic Cottret, Christophe Bruley, Franck Giacomoni, Laurent Vasseur, Aurélie Hirschler, Yohann Couté, Christophe Lechaplais, Marcel Salanoubat, David Bouyssié, Marie Courçon, Odile Schiltz, Fabien Jourdan, Pierre Le Ber, Alain Perret, Virginie Brun, Dominique Rolin, Jérôme Garin, Claudine Médigue, Christophe Junot, David Vallenet, Anne Gonzalez-de-Peredo, Myriam Ferro, Estelle Pujos-Guillot, Yann Herault, Christine Carapito, François Fenaille and Etienne A. Thévenot (ProMetIS consortium). https://github.com/ProMetIS.

ProMetIS/LATMX2 documentation built on March 30, 2020, 11:42 p.m.