beads_bam_bw: BEADS internal
In Przemol/rbeads: R implementation of Bias Elimination Algorithm for Deep Sequencing
Description
The function runs BEADS for signature BAM, BAM, BW, ANY:
signature(experiment='BamFile', control='BamFile', mappability='BigWigFile', genome='ANY')
Usage
1
2
3
beads_bam_bw(bam.file, bw.control, bw.mappability, genome, uniq = TRUE,
insert = 200L, mapq_cutoff = 10L, export = "BEADS", rdata = FALSE,
export_er = TRUE, quickMap = TRUE)
Details
This function is package internal and should not be executed directly
by users.
Przemol/rbeads documentation built on May 8, 2019, 3:46 a.m.
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Description
The function runs BEADS for signature BAM, BAM, BW, ANY:
signature(experiment='BamFile', control='BamFile', mappability='BigWigFile', genome='ANY')
Usage
1 2 3 | beads_bam_bw(bam.file, bw.control, bw.mappability, genome, uniq = TRUE,
insert = 200L, mapq_cutoff = 10L, export = "BEADS", rdata = FALSE,
export_er = TRUE, quickMap = TRUE)
|
Details
This function is package internal and should not be executed directly by users.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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