R/data.R

In QiliShi/NetworkSim: Network Comparison Based on Structural Equivalence and Graphlets

#' integrated PPI network
#'
#' A dataset containing the integrated PPI network from Biogrid, HPRD and mentha databases
#'
#'
#' @format A igraph object
#'
"databases.net"

#' Mutated genes in the sample TCGA_AF_2687
#'
#' A dataset containing Mutated genes
#'
#'
#' @format A  list
#'
"TCGA_AF_2687.Muts"

#' Mutated genes in the sample TCGA_A6_2686
#'
#' A dataset containing Mutated genes
#'
#'
#' @format A  list
#'
"TCGA_A6_2686.Muts"

#' PPI network of the sample TCGA_AF_2687
#'
#' A dataset containing a PPI network 
#'
#'
#' @format A igraph object
#'
"TCGA_AF_2687.net"

#' PPI network of the sample TCGA_A6_2686
#'
#' A dataset containing a PPI network 
#'
#'
#' @format A igraph object
#'
"TCGA_A6_2686.net"

#' PPI networks of the ten samples with colon adenocarcinoma 
#'
#' A dataset containing PPI networks 
#'
#'
#' @format A list 
#'
"COAD.net"