Man pages for Queen0044/HiCImpute
HiCImpute: An R Package Implementing "Bayesian Hierarchical Model for Identifying Structural Zeros and Enhancing Single-cell Hi-C Data"
| MCMCImpute | This is the flagship function of HiCImpute. It identifies... |
| PTSZ95 | This function calculates PTDO when fix PTSZ=0.95. |
| scHiC_assess | This function analyzes both simulated and real datasets,... |
| scHiC_hm | This function draws heatmap of HiC data so that we can... |
| scHiC_Kmeans | This function conduct Kmeans clustering analysis on scHi-C... |
| scHiC_ROC | This package draws ROC (Receiver operating characteristic)... |
| scHiC_simulate | This function simulates single cells from 3D structure. |
| scHiC_tSNE | This function visualize scHi-C data using t-SNE... |
| SEVI | This function generates scatterplot of expected versus... |
| SOVI | This function generates scatterplot of observed versus... |
