tests/testthat/test_vec2words.R

# context("vec2words")
#
# test_that("Keeps biological terms but not other digits", {
#   tmp <- c("CD4",
#            "CD8+",
#            "A/California",
#            "IL-2",
#            "JAWS II CELL, LPS, 45.5hr",
#            "BS_Kepler_017_70_22818_blood",
#            "subjects: MLN_Bris_M5, MLN_Bris_M6",
#            "and/or<br></br>",
#            "[gwas] *mark //br//& ?identifying' ",
#            "-word compound-word t-word -b")
#   res <- vec2Words(tmp)
#   expect_true( all(c("cd4", "cd8+", "il-2", "compound") %in% res) )
#   expect_false( any(grepl("_|70|\\.|,|;|:|<|\\[|\\?|\\&|\\*", res)) )
#   expect_true( all(nchar(res) > 1) )
# })
RGLab/BioCorpus documentation built on Dec. 18, 2021, 8:47 a.m.