autoGate | R Documentation |
This function tries to fit a single norm2Filter based on a rough
preselection of the data. This function is considered internal. Please
use the API provided by lymphGate
.
autoGate(x, ..., scale = 2.5)
x |
An object of class |
... |
Named arguments or a list of the ranges used for the
initial rough preselection. This gets passed on to
|
scale |
The |
The flowSet
is first filtered using a rectangleGate
and
the norm2Filter
is subsequently fitted to the remaining subset.
A list with items:
x |
The filtered |
n2gate |
The |
n2gateResults |
The
|
Florian Hahne
lymphGate
,
norm2Filter
library(flowCore)
data(GvHD)
flowStats:::autoGate(GvHD[10:15], "FSC-H"=c(100,500), "SSC-H"=c(0, 400))
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