ncdfFlowSet-constructor: create ncdfFlowSet from flowSet

In RGLab/ncdfFlow: ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.

create ncdfFlowSet from flowSet

Description

Normally the ncdfFlowSet is constructed by loading raw FCS files using read.ncdfFlowSet. In case there is a legacy flowSet object, we can convert it to ncdfFlowSet with this constructor.

Usage

## S4 method for signature 'flowSet'
ncdfFlowSet(x, ncdfFile, dim = 2, compress = 0)

Arguments

x	flowSet
ncdfFile	character specifies the file name of cdf file
dim	integer see details in read.ncdfFlowset.
compress	integer see details in read.ncdfFlowset.

Examples

data(GvHD)
fs <- GvHD[1:2]
ncfs <- ncdfFlowSet(fs)

RGLab/ncdfFlow documentation built on July 5, 2022, 10:20 a.m.