RMTbioinfo/ExCluster
ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition

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RMTbioinfo/ExCluster: ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition
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ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition

.BBSoptions
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/ExClust_compute_stats.R R/ExClust_main_function.R R/ExCluster.R R/ExCluster_errors.R R/GFF_convert.R R/GRangesFromExClustResults.R R/load_ExCluster_functions.R R/plotExonlog2FC.R R/processCounts.R
inst/NEWS
inst/extdata/iPSC_batch1_20_cond1_rep1.bam
inst/extdata/iPSC_batch1_20_cond1_rep2.bam
inst/extdata/iPSC_batch1_20_cond2_rep1.bam
inst/extdata/iPSC_batch1_20_cond2_rep2.bam
inst/extdata/normCounts.txt
inst/extdata/sub_ExClust_results.txt
inst/extdata/sub_gen.v23.ExClust.gff3
inst/extdata/sub_gen.v23.gtf
inst/script/toydata_bash_commands
man/ExCluster.Rd man/GFF_convert.Rd man/GRangesFromExClustResults.Rd man/plotExonlog2FC.Rd man/processCounts.Rd
vignettes/ExCluster.Rnw
RMTbioinfo/ExCluster documentation built on May 15, 2019, 3:14 p.m.

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