gInteractionsTocMap: Genomics Interaction to Genomic Map
In RMalinverni/hicPainteR: Visualize -C data
Description
Usage
Arguments
References
See Also
Examples
View source: R/gInteractionsTocMap.R
Description
transform a GenomicsInteraction object to a Granges with mCol "edge" and "Ys" that will be use for create a hicPainter Object,
if zoom is provided it will extract only this portion of genome
Usage
1
gInteractionsTocMap( GI, zoom = NA )
Arguments
GI
GenomicInteractions object
zoom
character - genomic coordinate in wich the GRanges will be contruct, if not privide it will use all the contact of GI.
The format need to be "chromosome:start-end" ( default = NA )
References
...
See Also
...
Examples
1
RMalinverni/hicPainteR documentation built on Nov. 11, 2020, 11:08 a.m.
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Description Usage Arguments References See Also Examples
View source: R/gInteractionsTocMap.R
Description
transform a GenomicsInteraction object to a Granges with mCol "edge" and "Ys" that will be use for create a hicPainter Object, if zoom is provided it will extract only this portion of genome
Usage
1 | gInteractionsTocMap( GI, zoom = NA )
|
Arguments
GI |
GenomicInteractions object |
zoom |
character - genomic coordinate in wich the GRanges will be contruct, if not privide it will use all the contact of GI. The format need to be "chromosome:start-end" ( default = NA ) |
References
...
See Also
...
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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