mRNA: mRNA datasets from TCGA project
In RTCGA/RTCGA.mRNA: mRNA datasets from The Cancer Genome Atlas Project
Description
Usage
Details
Value
Source
Examples
Description
Package provides mRNA datasets from The Cancer Genome Atlas Project for
all cohorts types from http://gdac.broadinstitute.org/.
Data were downloaded using RTCGA-package and contain snapshots for
the date: 2015-11-01. The process is described here:
http://rtcga.github.io/RTCGA/.
Use cases, examples and information about datasets in RTCGA.data
family can be found here: browseVignettes("RTCGA"). mRNA data format
is explained here https://wiki.nci.nih.gov/display/TCGA/Gene+expression+data.
Converting RTCGA.mRNA datasets from data.frames to Bioconductor classes is explained here convertTCGA.
Usage
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Details
browseVignettes("RTCGA")
Value
Data frames with mRNA data.
Source
http://gdac.broadinstitute.org/
Examples
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## Not run:
browseVignettes("RTCGA")
## End(Not run)
RTCGA/RTCGA.mRNA documentation built on May 8, 2019, 7:35 a.m.
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Description Usage Details Value Source Examples
Description
Package provides mRNA datasets from The Cancer Genome Atlas Project for
all cohorts types from http://gdac.broadinstitute.org/.
Data were downloaded using RTCGA-package and contain snapshots for
the date: 2015-11-01. The process is described here:
http://rtcga.github.io/RTCGA/.
Use cases, examples and information about datasets in RTCGA.data
family can be found here: browseVignettes("RTCGA"). mRNA data format
is explained here https://wiki.nci.nih.gov/display/TCGA/Gene+expression+data.
Converting RTCGA.mRNA datasets from data.frames to Bioconductor classes is explained here convertTCGA.
Usage
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 |
Details
browseVignettes("RTCGA")
Value
Data frames with mRNA data.
Source
http://gdac.broadinstitute.org/
Examples
1 2 3 4 | ## Not run:
browseVignettes("RTCGA")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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