mutations: Mutations datasets from TCGA project

Description Usage Details Value Source

Description

Package provides mutations datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Data were downloaded using RTCGA-package and contain snapshots for the date: 2015-11-01. The process is described here: http://rtcga.github.io/RTCGA/. Use cases, examples and information about datasets in RTCGA.data family can be found here: browseVignettes("RTCGA") Mutations data format is explained here https://wiki.nci.nih.gov/display/TCGA/Mutation+Annotation+Format+(MAF)+Specification. There is extra one column with patients' barcodes.

Usage

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Details

browseVignettes("RTCGA")

Value

Data frames with mutations data.

Source

http://gdac.broadinstitute.org/


RTCGA/RTCGA.mutations documentation built on May 8, 2019, 8:01 a.m.