rnaseq.20160128: rnaseq datasets from TCGA project from 2016-01-28 release...

In RTCGA/RTCGA.rnaseq.20160128: RNASeq datasets from The Cancer Genome Atlas Project from 2016-01-28

Description

Package provides rnaseq datasets from The Cancer Genome Atlas Project for all cohorts types from http://gdac.broadinstitute.org/. Data were downloaded using RTCGA-package and contain snapshots for the release date: 2016-01-28 . Visit RTCGA site: http://rtcga.github.io/RTCGA/. Use cases, examples and information about datasets in RTCGA.rnaseq.20160128 can be found here: browseVignettes("RTCGA"). Link to the data format explanation is in the package DESCRIPTION file.

Usage

ACC.rnaseq.20160128

BLCA.rnaseq.20160128

BRCA.rnaseq.20160128

CESC.rnaseq.20160128

CHOL.rnaseq.20160128

COADREAD.rnaseq.20160128

DLBC.rnaseq.20160128

ESCA.rnaseq.20160128

GBMLGG.rnaseq.20160128

HNSC.rnaseq.20160128

KICH.rnaseq.20160128

KIPAN.rnaseq.20160128

KIRC.rnaseq.20160128

KIRP.rnaseq.20160128

LAML.rnaseq.20160128

LIHC.rnaseq.20160128

LUAD.rnaseq.20160128

LUSC.rnaseq.20160128

MESO.rnaseq.20160128

OV.rnaseq.20160128

PAAD.rnaseq.20160128

PCPG.rnaseq.20160128

PRAD.rnaseq.20160128

SARC.rnaseq.20160128

SKCM.rnaseq.20160128

STAD.rnaseq.20160128

STES.rnaseq.20160128

TGCT.rnaseq.20160128

THCA.rnaseq.20160128

THYM.rnaseq.20160128

UCEC.rnaseq.20160128

UCS.rnaseq.20160128

UVM.rnaseq.20160128

Arguments

metadata

A logical indicating whether load data into the workspace (default, FALSE) or to only display the object's metadata (TRUE). See examples.

Details

browseVignettes("RTCGA")

Source

http://gdac.broadinstitute.org/

Examples

## Not run: 
 ACC.rnaseq.20160128(metadata = TRUE) 
 ACC.rnaseq.20160128(metadata = FALSE) 
 ACC.rnaseq.20160128 

## End(Not run)

RTCGA/RTCGA.rnaseq.20160128 documentation built on May 8, 2019, 8:01 a.m.