Deconvolve_music: Deconvolve_music
In RaikOtto/ArtDeco: Alikeness Based on Regression on Transciptome DECOnvolution
Description
Usage
Arguments
Value
View source: R/Deconvolve_music.R
Description
Deconvolve_music Utilizes MuSiC for deconvolution. Wrapper function.
Usage
1
Deconvolve_music(deconvolution_data, models_list, models, nr_permutations)
Arguments
deconvolution_data
A data frame that contains the gene expression
data. Rows are expected to be HGNC symbols and columns are expected to
contain the samples.
models_list
List of models to be used.
models
Which model to use.
nr_permutations
Amount perturbations.
Value
Matrix containing the deconvolution results.
RaikOtto/ArtDeco documentation built on Oct. 30, 2021, 6:20 p.m.
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Description Usage Arguments Value
View source: R/Deconvolve_music.R
Description
Deconvolve_music Utilizes MuSiC for deconvolution. Wrapper function.
Usage
1 | Deconvolve_music(deconvolution_data, models_list, models, nr_permutations)
|
Arguments
deconvolution_data |
A data frame that contains the gene expression data. Rows are expected to be HGNC symbols and columns are expected to contain the samples. |
models_list |
List of models to be used. |
models |
Which model to use. |
nr_permutations |
Amount perturbations. |
Value
Matrix containing the deconvolution results.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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