In Reed-Math241/elephants: East African Elephant Biological Data

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)

Elephants

The goal of the "elephants" package is to provide a dataset involving elephants! The dataset can be used for data exploration, visualization, and statistical analysis. For example, what parks were the elephants primarily located in and what sex were these elephants?

Examples

library(tidyverse)
library(elephants)

elephants %>%
  filter(sex == "Female" | sex == "Male" ) %>%
  ggplot(mapping = aes(x = park, fill = sex)) +
    geom_bar(position = "dodge") +
    scale_fill_manual(values = c("tomato", "slateblue")) + 
    theme_minimal() +
    theme(panel.border = element_blank(),
      panel.grid.major = element_blank())  +
    labs(x = "Park", y = "Count", title = "Elephant park locations by sex")

We can see that the majority of elephants were located in Murchison Falls, with a slightly greater amount of females in each park.

Another example which utilizes more advanced dplyr functions and plot aesthetics:

library(tidyverse)
library(elephants)
library(ggthemes) #optional

elephants %>%
  mutate(diff = (tusk_wght_r-tusk_wght_l)/1000,
         balance = case_when(
           diff <= 0 ~ "Left",
           diff >= 0 ~ "Right"
         )) %>%
  drop_na(balance) %>%
  ggplot(aes(x = diff, y = age, color = balance)) +
  geom_vline(xintercept = 0, color = "#010000") +
  geom_point(alpha = 0.3, size = 1) +
  scale_y_continuous(breaks = seq(0, 80, by = 10)) +
  scale_x_continuous(breaks = seq(-10, 15, by = 5), labels = c("10", "5", "0", "5", "10", "15")) +
  scale_color_manual(values = c("Left" = "tomato", "Right" = "slateblue")) +
  annotate("text", x = -5, y = 70, label = "Heavier left tusk", color = "tomato") +
  annotate("text", x = 5, y = 70, label = "Heavier right tusk", color = "slateblue") +
  ggthemes::theme_few() + #optional
  labs(title = "Differences in elephant tusk weight by age",
       subtitle = paste("n = 2724"),
       x = "Difference in tusk weight (kg)",
       y = "Age (years)",
       color = "Weight skewed: ",
       caption = "Data from the Ian Parker East African Elephants Data Sheet"
       ) +
  theme(legend.position = "none",
        plot.subtitle = element_text(color = "#7BB5FA"),
        plot.caption = element_text(color = "#7BB5FA"),
        panel.background = element_rect(fill = "#FDFECC"),
        plot.background = element_rect(fill = "#C7E9F3"))

We can see that elephant tusk weight distribution appears to have a greater number of outliers as the age of elephants increases. There are also notable outliers that can be identified in this plot, such as that of the high age value or that of the significantly right-skewed tusk.

Installation

The development version of "elephants" is available from GitHub with:

# install.packages("devtools")
devtools::install_github("https://github.com/Reed-Math241/elephants")

Reed-Math241/elephants documentation built on Dec. 18, 2021, 9:56 a.m.