structure.plot: structure community plots
In RenaudJau/ComSII: Community Structure Integrity Index Calculations

Description Usage Arguments See Also

Performs a barplot of abundances of species in assessed community compared to a REFerence community

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structure.plot(INDICE, FACTOR, MULTI = T, MTITLE = "", ABMAX = 5,
  col1 = "grey60", col2 = "white", col3 = "red", col4 = "orange",
  noms = "T", cex_noms = 1, ...)

`INDICE`	An object issued from `ComStructIndices` function
`FACTOR`	A factor list, a barplot of species mean abundances will be performed for each factor level. If no factor is specified, MULTI=F should be specified.
`MULTI`	If no factor is specified, MULTI=F should be specified
`MTITLE`	Main title of the plot
`ABMAX`	Numerical value of the maximum abundance
`col1`	Colour information for the Reference mean abundances barplot
`col2`	Colour information for the Reference mean abundances in assessed community barplot, i.e. "missing abundances"
`col3`	Colour information for the abundances of target species in the assessed community
`col4`	Colour information for the "higher abundances" in the assessed community
`noms`	If other than "T", species names are not given
`cex_noms`	expansion factor for species names
`...`	other parameters from the `barplot` function