prepareforest: Title

Description Usage Arguments

Description

Title

Usage

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prepareforest(data, year = 1992, censuscol = "campagne", label = "sp_lab",
  speciescol = "species", speciestraits, replacement = "local",
  i_arbre = "i_arbre", X = "X", Y = "Y", dbh = "dbh", milimeters = T,
  plotcol = "n_parcelle")

Arguments

data

data.frame ; Basically the censuses for the plot you want to work on.

year

Integer. The year corresponding to your simulation startpoint.

censuscol

Character. Name of the column indicating the censuses years.

label

Character.Name of the column indicating species labels, if you have defined them.

speciescol

Character. The name of the column indicating species identity. Should be of the form Genus_species matching case and separator.

speciestraits

Data.frame. The table containing your species-specific traits that will be used to parametrise TROLL.

replacement

Character. Procedure you choose to replace individuals belonging to missing species.

X

Character. The name of the column containing X coordinates. At the plot scale, don't put an UTM or other shit !

Y

Character. The name of the column containing Y coordinates. At the plot scale, don't put an UTM or other shit !

dbh

Character. Name of the column containing the diameters at breast height. Circumferences are handler in the "extractplot" function.

milimeters

Logical. Indicates whether the diameters are in milimeters or not. Defaults to FALSE as this unit is unusual in most censuses.


Riodinino/TROLLmsc documentation built on May 14, 2019, 3:08 a.m.