Files in Rmomal/EMtree
Infers Direct Species Association Networks using Tree Averaging
.DS_Store
.Rbuildignore
.Renviron
.Rprofile
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
EMtree.Rproj
NAMESPACE
NEWS.md
R/.DS_Store
R/.Rapp.history
R/F_Graphs.R
R/F_inference.R
R/FunctionsMatVec.R
R/FunctionsTree.R
R/gener_data.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
cran-comments.md
dev_history.R
docs/.DS_Store
docs/404.html
docs/articles/Fatala_Net.html
docs/articles/Fatala_Net_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/Fatala_Net_files/anchor-sections-1.0/anchor-sections.css
docs/articles/Fatala_Net_files/anchor-sections-1.0/anchor-sections.js
docs/articles/Fatala_Net_files/d3-4.5.0/LICENSE
docs/articles/Fatala_Net_files/d3-4.5.0/d3.min.js
docs/articles/Fatala_Net_files/figure-html/output-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-10-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-11-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-12-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-13-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-14-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-5-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-6-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-6-2.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-7-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-8-1.png
docs/articles/Fatala_Net_files/figure-html/unnamed-chunk-9-1.png
docs/articles/Fatala_Net_files/forceNetwork-binding-0.4/forceNetwork.js
docs/articles/Fatala_Net_files/htmlwidgets-1.5.2/htmlwidgets.js
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/ComparEMtree.html
docs/reference/EMtree-1.png
docs/reference/EMtree.html
docs/reference/EdgeProba.html
docs/reference/FitBeta-1.png
docs/reference/FitBeta.html
docs/reference/FitBetaStatic-1.png
docs/reference/FitBetaStatic.html
docs/reference/Kirshner.html
docs/reference/Laplacian.html
docs/reference/Meila.html
docs/reference/Psi_alpha.html
docs/reference/ResampleEMtree-1.png
docs/reference/ResampleEMtree-2.png
docs/reference/ResampleEMtree.html
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/SimCluster.html
docs/reference/SpannTree.html
docs/reference/StATS-1.png
docs/reference/StATS.html
docs/reference/SumTree.html
docs/reference/ToSym.html
docs/reference/ToVec.html
docs/reference/compar_graphs-1.png
docs/reference/compar_graphs.html
docs/reference/compare_graphs-1.png
docs/reference/compare_graphs.html
docs/reference/data_from_scratch-1.png
docs/reference/data_from_scratch-2.png
docs/reference/data_from_scratch.html
docs/reference/draw_network-1.png
docs/reference/draw_network-2.png
docs/reference/draw_network.html
docs/reference/erdos.html
docs/reference/figures/README-output-1.png
docs/reference/figures/README-pressure-1.png
docs/reference/figures/README-unnamed-chunk-5-1.png
docs/reference/figures/README-unnamed-chunk-6-1.png
docs/reference/figures/README-unnamed-chunk-6-2.png
docs/reference/figures/README-unnamed-chunk-7-1.png
docs/reference/figures/README-unnamed-chunk-7-2.png
docs/reference/figures/README-unnamed-chunk-8-1.png
docs/reference/figures/README-unnamed-chunk-9-1.png
docs/reference/freq_selec.html
docs/reference/freq_selec_list.html
docs/reference/generator_PLN.html
docs/reference/generator_graph.html
docs/reference/generator_param.html
docs/reference/index.html
docs/reference/inverse.gmp.html
docs/reference/pipe.html
man/EMtree.Rd
man/EdgeProba.Rd
man/FitBeta.Rd
man/Kirshner.Rd
man/Laplacian.Rd
man/Meila.Rd
man/Psi_alpha.Rd
man/ResampleEMtree.Rd
man/SimCluster.Rd
man/SpannTree.Rd
man/StATS.Rd
man/SumTree.Rd
man/ToSym.Rd
man/ToVec.Rd
man/data_from_scratch.Rd
man/draw_network.Rd
man/erdos.Rd
man/figures/README-output-1.png
man/figures/README-pressure-1.png
man/figures/README-unnamed-chunk-5-1.png
man/figures/README-unnamed-chunk-6-1.png
man/figures/README-unnamed-chunk-6-2.png
man/figures/README-unnamed-chunk-7-1.png
man/figures/README-unnamed-chunk-7-2.png
man/figures/README-unnamed-chunk-8-1.png
man/figures/README-unnamed-chunk-9-1.png
man/freq_selec.Rd
man/generator_PLN.Rd
man/generator_graph.Rd
man/generator_param.Rd
tests/.DS_Store
tests/testthat.R
tests/testthat/Rplots.pdf
tests/testthat/test-F_Graphs.R
tests/testthat/test-F_inference.R
tests/testthat/test-FunctionsMatVec.R
tests/testthat/test-FunctionsTree.R
tests/testthat/test-test_gener_data.R
vignettes/.DS_Store
vignettes/.gitignore
vignettes/Fatala_Net.Rmd
vignettes/Fatala_Net_cache/html/__packages
vignettes/Fatala_Net_cache/html/unnamed-chunk-5_86f8fc68497168c7bb4dfea54bbcbb6d.RData
vignettes/Fatala_Net_cache/html/unnamed-chunk-5_86f8fc68497168c7bb4dfea54bbcbb6d.rdb
vignettes/Fatala_Net_cache/html/unnamed-chunk-5_86f8fc68497168c7bb4dfea54bbcbb6d.rdx
vignettes/Fatala_Net_files/figure-html/output-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-10-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-11-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-12-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-13-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-14-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-8-1.png
vignettes/Fatala_Net_files/figure-html/unnamed-chunk-9-1.png
vignettes/Partial_correlations.Rmd
