sm_regrid: sm_regrid

In RobertJDReid/screenmill.grid: screenmill grid manipulation functions

sm_regrid

Description

Input: a plate object from the 'read_plate' function which contains annotation, crop and grid data for a specific plate image. Grid data is replaced by a call to 'screenmill:::locate_grid'. Used to either redo a grid or make a de novo grid after fixing crop issues

Usage

sm_regrid(
  plate_obj,
  grid_rows,
  grid_cols,
  replicates,
  colony_radius = 1,
  max_smooth = 5,
  view = TRUE
)

Arguments

plate_obj	a screenmill plate object loaded by the read_plate function
grid_rows	number of colony rows on plate image
grid_cols	number of colony columns on plate image
replicates	number of replicates in each plate grid. This is always a square; e.g. 1,4,16
colony_radius	defaults to 1
max_smooth	defaults to 5

RobertJDReid/screenmill.grid documentation built on April 2, 2022, 6:34 a.m.