revdep/README-v1.2.md
In Robertus100/tibble: Simple Data Frames
Setup
Platform
|setting |value |
|:--------|:----------------------------|
|version |R version 3.3.3 (2017-03-06) |
|system |x86_64, linux-gnu |
|ui |X11 |
|language |(EN) |
|collate |en_US.UTF-8 |
|tz |Zulu |
|date |2017-03-31 |
Packages
|package |* |version |date |source |
|:--------------|:--|:----------|:----------|:--------------------------------|
|assertthat | |0.1 |2013-12-06 |cran (@0.1) |
|knitr | |1.15.1 |2016-11-22 |cran (@1.15.1) |
|lazyeval | |0.2.0 |2016-06-12 |cran (@0.2.0) |
|microbenchmark | |1.4-2.1 |2015-11-25 |cran (@1.4-2.1) |
|nycflights13 | |0.2.2 |2017-01-27 |cran (@0.2.2) |
|Rcpp | |0.12.10 |2017-03-31 |Github (RcppCore/Rcpp@886f5df) |
|rmarkdown | |1.4 |2017-03-24 |cran (@1.4) |
|testthat | |1.0.2.9000 |2017-02-27 |Github (hadley/testthat@b72a228) |
|tibble | |1.2 |2016-08-26 |cran (@1.2) |
|withr | |1.0.2 |2016-06-20 |CRAN (R 3.3.1) |
Check results
118 packages
|package |version | errors| warnings| notes|
|:-----------------|:-------|------:|--------:|-----:|
|abjutils |0.0.1 | 0| 0| 0|
|anomalyDetection |0.1.1 | 0| 0| 0|
|biomartr |0.4.0 | 0| 0| 0|
|blkbox |1.0 | 0| 0| 2|
|blob |1.0.0 | 0| 0| 0|
|blockTools |0.6-3 | 0| 0| 0|
|bold |0.4.0 | 0| 0| 1|
|bsam |1.1.1 | 0| 0| 0|
|ccafs |0.1.0 | 0| 0| 0|
|cdata |0.1.0 | 0| 0| 0|
|cellranger |1.1.0 | 0| 0| 0|
|checkmate |1.8.2 | 0| 0| 0|
|corrr |0.2.1 | 0| 0| 0|
|countyweather |0.1.0 | 0| 0| 0|
|cpr |0.2.3 | 0| 0| 0|
|datapasta |2.0.0 | 0| 0| 0|
|datastepr |0.0.2 | 0| 0| 0|
|dat |0.1.0 | 1| 0| 0|
|DiagrammeR |0.9.0 | 0| 0| 1|
|doctr |0.2.0 | 0| 0| 0|
|docxtractr |0.2.0 | 0| 0| 0|
|dotwhisker |0.2.3 | 0| 0| 0|
|dplyr |0.5.0 | 0| 0| 1|
|easyformatr |0.1.2 | 0| 0| 0|
|ecoseries |0.1.1 | 0| 0| 0|
|enigma |0.3.0 | 0| 0| 0|
|eurostat |3.1.1 | 0| 0| 0|
|evaluator |0.1.0 | 0| 0| 0|
|fbar |0.1.23 | 0| 0| 0|
|feather |0.3.1 | 0| 0| 0|
|fileplyr |0.2.0 | 0| 0| 0|
|filesstrings |0.3.2 | 0| 0| 0|
|flextable |0.1.0 | 0| 1| 0|
|foghorn |0.4.2 | 0| 0| 0|
|forcats |0.2.0 | 0| 0| 0|
|FSelectorRcpp |0.1.2 | 1| 0| 2|
|geojson |0.1.2 | 0| 0| 0|
|getlandsat |0.1.0 | 0| 0| 0|
|ggalt |0.4.0 | 0| 0| 0|
|ggenealogy |0.3.0 | 0| 0| 0|
|ggfortify |0.4.1 | 0| 0| 1|
|ggguitar |0.1.1 | 0| 0| 0|
|ggimage |0.0.4 | 1| 0| 0|
|ggplot2 |2.2.1 | 0| 0| 0|
|ggpmisc |0.2.14 | 0| 0| 0|
|giphyr |0.1.0 | 0| 0| 0|
|gitlabr |0.7 | 0| 0| 0|
|GSODR |1.0.1 | 0| 0| 0|
|haven |1.0.0 | 2| 0| 1|
|hddtools |0.6 | 1| 0| 0|
|heemod |0.8.0 | 1| 1| 1|
|highcharter |0.5.0 | 0| 1| 1|
|hypoparsr |0.1.0 | 0| 0| 0|
|inferr |0.1.0 | 0| 0| 0|
|isdparser |0.2.0 | 0| 0| 0|
|jpmesh |0.3.0 | 0| 0| 1|
|knitr |1.15.1 | 0| 0| 0|
|KraljicMatrix |0.1.1 | 0| 0| 0|
|manifestoR |1.2.3 | 0| 0| 0|
|modelr |0.1.0 | 0| 0| 0|
|modeval |0.1.2 | 0| 0| 0|
|monkeylearn |0.1.1 | 0| 0| 0|
|mregions |0.1.4 | 0| 0| 0|
|mrgsolve |0.8.6 | 0| 0| 1|
|msgtools |0.2.7 | 0| 0| 0|
|myTAI |0.5.0 | 0| 0| 1|
|natserv |0.1.4 | 0| 0| 0|
|nycflights13 |0.2.2 | 0| 0| 1|
|oai |0.2.2 | 0| 0| 0|
|observer |0.1.2 | 0| 0| 1|
|odbc |1.0.1 | 0| 0| 0|
|officer |0.1.1 | 2| 1| 0|
|openadds |0.2.0 | 0| 0| 0|
|pangaear |0.3.0 | 0| 0| 0|
|pdfsearch |0.1.1 | 0| 0| 0|
|photobiologyInOut |0.4.13 | 0| 0| 0|
|photobiology |0.9.14 | 0| 0| 0|
|phylopath |0.2.3 | 0| 0| 0|
|plotly |4.5.6 | 1| 0| 0|
|poio |0.0-3 | 0| 0| 0|
|prcr |0.1.1 | 0| 0| 0|
|radiant.data |0.6.0 | 0| 0| 0|
|randNames |0.2.3 | 0| 0| 0|
|rbcb |0.1.0 | 0| 0| 0|
|rbgm |0.0.4 | 0| 0| 0|
|rbhl |0.3.0 | 0| 0| 0|
|rdefra |0.3.4 | 0| 0| 0|
|rdpla |0.1.0 | 0| 0| 0|
|readr |1.1.0 | 0| 0| 1|
|refimpact |0.1.0 | 1| 0| 0|
|reutils |0.2.3 | 0| 0| 0|
|rgbif |0.9.7 | 0| 0| 0|
|rgho |1.0.1 | 0| 0| 0|
|riem |0.1.1 | 0| 0| 0|
|rif |0.1.0 | 0| 0| 0|
|ritis |0.5.4 | 0| 0| 0|
|rmarkdown |1.4 | 0| 0| 1|
|rnoaa |0.6.6 | 0| 0| 0|
|rorcid |0.3.0 | 0| 0| 0|
|rtide |0.0.3 | 0| 0| 0|
|sf |0.4-1 | 0| 0| 1|
|sjmisc |2.3.1 | 0| 0| 0|
|sjPlot |2.3.1 | 0| 0| 0|
|sjstats |0.9.0 | 0| 0| 1|
|solrium |0.4.0 | 0| 0| 0|
|spbabel |0.4.5 | 0| 0| 0|
|spdplyr |0.1.2 | 0| 0| 0|
|spocc |0.6.0 | 0| 0| 0|
|srvyr |0.2.0 | 0| 0| 0|
|taxize |0.8.4 | 0| 0| 0|
|tidyquant |0.4.0 | 0| 0| 0|
|tidyr |0.6.1 | 0| 0| 0|
|tidyverse |1.1.1 | 0| 0| 0|
|units |0.4-3 | 0| 0| 0|
|unpivotr |0.1.0 | 0| 0| 0|
|valr |0.1.2 | 0| 0| 1|
|wand |0.2.0 | 0| 0| 0|
|worrms |0.1.0 | 0| 0| 0|
abjutils (0.0.1)
Maintainer: Fernando Correa fcorrea@abj.org.br
0 errors | 0 warnings | 0 notes
anomalyDetection (0.1.1)
Maintainer: Bradley Boehmke bradleyboehmke@gmail.com
Bug reports: https://github.com/bradleyboehmke/anomalyDetection/issues
0 errors | 0 warnings | 0 notes
biomartr (0.4.0)
Maintainer: Hajk-Georg Drost hgd23@cam.ac.uk
Bug reports: https://github.com/HajkD/biomartr/issues
0 errors | 0 warnings | 0 notes
blkbox (1.0)
Maintainer: Boris Guennewig b.guennewig@garvan.org.au
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘bigrf’
checking dependencies in R code ... NOTE
Missing or unexported object: ‘xgboost::predict’
blob (1.0.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/blob/issues
0 errors | 0 warnings | 0 notes
blockTools (0.6-3)
Maintainer: Ryan T. Moore rtm@american.edu
0 errors | 0 warnings | 0 notes
bold (0.4.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/bold/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘sangerseqR’
bsam (1.1.1)
Maintainer: Ian Jonsen ian.jonsen@mq.edu.au
Bug reports: https://github.com/ianjonsen/bsam/issues
0 errors | 0 warnings | 0 notes
ccafs (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/ccafs/issues
0 errors | 0 warnings | 0 notes
cdata (0.1.0)
Maintainer: John Mount jmount@win-vector.com
Bug reports: https://github.com/WinVector/cdata/issues
0 errors | 0 warnings | 0 notes
cellranger (1.1.0)
Maintainer: Jennifer Bryan jenny@stat.ubc.ca
Bug reports: https://github.com/rsheets/cellranger/issues
0 errors | 0 warnings | 0 notes
checkmate (1.8.2)
Maintainer: Michel Lang michellang@gmail.com
Bug reports: https://github.com/mllg/checkmate/issues
0 errors | 0 warnings | 0 notes
corrr (0.2.1)
Maintainer: Simon Jackson drsimonjackson@gmail.com
Bug reports: https://github.com/drsimonj/corrr/issues
0 errors | 0 warnings | 0 notes
countyweather (0.1.0)
Maintainer: Rachel Severson rachel.severson@colostate.edu
0 errors | 0 warnings | 0 notes
cpr (0.2.3)
Maintainer: Peter DeWitt dewittpe@gmail.com
0 errors | 0 warnings | 0 notes
datapasta (2.0.0)
Maintainer: Miles McBain miles.mcbain@gmail.com
Bug reports: https://github.com/milesmcbain/datapasta/issues
0 errors | 0 warnings | 0 notes
datastepr (0.0.2)
Maintainer: Brandon Taylor brandon.taylor221@gmail.com
Bug reports: https://github.com/bramtayl/datastepr/issues
0 errors | 0 warnings | 0 notes
dat (0.1.0)
Maintainer: Sebastian Warnholz wahani@gmail.com
Bug reports: https://github.com/wahani/dat/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [10s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
^
tests/testthat/test-trunc-mat.R:5:3: style: Variable and function names should not be longer than 25 characters.
print_arg_names_without_ellipsis <- setdiff(print_arg_names, "...")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tests/testthat/test-trunc-mat.R:9:16: style: Variable and function names should not be longer than 25 characters.
expect_equal(print_arg_names_without_ellipsis, trunc_mat_arg_names)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
testthat results ================================================================
OK: 107 SKIPPED: 0 FAILED: 1
1. Failure: Package Style (@test-lintr.R#5)
Error: testthat unit tests failed
Execution halted
DiagrammeR (0.9.0)
Maintainer: Richard Iannone riannone@me.com
Bug reports: https://github.com/rich-iannone/DiagrammeR/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 10.6Mb
sub-directories of 1Mb or more:
extdata 2.4Mb
htmlwidgets 4.7Mb
img 2.8Mb
doctr (0.2.0)
Maintainer: Caio Lente me@ctlente.com
0 errors | 0 warnings | 0 notes
docxtractr (0.2.0)
Maintainer: Bob Rudis bob@rudis.net
0 errors | 0 warnings | 0 notes
dotwhisker (0.2.3)
Maintainer: Yue Hu yue-hu-1@uiowa.edu
Bug reports: https://github.com/fsolt/dotwhisker/issues
0 errors | 0 warnings | 0 notes
dplyr (0.5.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/dplyr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 23.5Mb
sub-directories of 1Mb or more:
libs 21.4Mb
easyformatr (0.1.2)
Maintainer: Brandon Taylor brandon.taylor221@gmail.com
Bug reports: https://github.com/bramtayl/easyformatr/issues
0 errors | 0 warnings | 0 notes
ecoseries (0.1.1)
Maintainer: Fernando Teixeira fernando.teixeira@fgv.br
Bug reports: https://github.com/fernote7/ecoseries/issues
0 errors | 0 warnings | 0 notes
enigma (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropengov/enigma/issues
0 errors | 0 warnings | 0 notes
eurostat (3.1.1)
Maintainer: Leo Lahti leo.lahti@iki.fi
Bug reports: https://github.com/ropengov/eurostat/issues
0 errors | 0 warnings | 0 notes
evaluator (0.1.0)
Maintainer: David Severski davidski@deadheaven.com
Bug reports: https://github.com/davidski/evaluator/issues
0 errors | 0 warnings | 0 notes
fbar (0.1.23)
Maintainer: Max Conway conway.max1@gmail.com
0 errors | 0 warnings | 0 notes
feather (0.3.1)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/wesm/feather/issues
0 errors | 0 warnings | 0 notes
fileplyr (0.2.0)
Maintainer: KS Srikanth sri.teach@gmail.com
Bug reports: https://github.com/talegari/fileplyr/issues
0 errors | 0 warnings | 0 notes
filesstrings (0.3.2)
Maintainer: Rory Nolan rorynoolan@gmail.com
Bug reports: https://www.github.com/rorynolan/filesstrings/issues
0 errors | 0 warnings | 0 notes
flextable (0.1.0)
Maintainer: David Gohel david.gohel@ardata.fr
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: officer
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
Quitting from lines 39-41 (format.Rmd)
Error: processing vignette 'format.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
foghorn (0.4.2)
Maintainer: Francois Michonneau francois.michonneau@gmail.com
Bug reports: https://github.com/fmichonneau/foghorn/issues
0 errors | 0 warnings | 0 notes
forcats (0.2.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/tidyverse/forcats/issues
0 errors | 0 warnings | 0 notes
FSelectorRcpp (0.1.2)
Maintainer: Zygmunt Zawadzki zygmunt@zstat.pl
Bug reports: https://github.com/mi2-warsaw/FSelectorRcpp/issues
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘FSelectorRcpp-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: feature_search
> ### Title: General Feature Searching Engine
> ### Aliases: feature_search
>
> ### ** Examples
>
>
> # Enable parallelization in examples
> library(doSNOW) # doSNOW has an option for progress bar
Loading required package: foreach
Loading required package: iterators
Loading required package: snow
> cl <- makeCluster(2)
Loading required namespace: Rmpi
Error in Rmpi::mpi.comm.spawn(slave = mpitask, slavearg = args, nslaves = count, :
MPI_Comm_spawn is not supported.
Calls: makeCluster -> makeMPIcluster -> <Anonymous>
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RTCGA.rnaseq’
checking installed package size ... NOTE
installed size is 9.7Mb
sub-directories of 1Mb or more:
doc 2.2Mb
libs 7.3Mb
geojson (0.1.2)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/geojson/issues
0 errors | 0 warnings | 0 notes
getlandsat (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropenscilabs/getlandsat/issues
0 errors | 0 warnings | 0 notes
ggalt (0.4.0)
Maintainer: Bob Rudis bob@rud.is
Bug reports: https://github.com/hrbrmstr/ggalt/issues
0 errors | 0 warnings | 0 notes
ggenealogy (0.3.0)
Maintainer: Lindsay Rutter lrutter@iastate.edu
0 errors | 0 warnings | 0 notes
ggfortify (0.4.1)
Maintainer: Masaaki Horikoshi sinhrks@gmail.com
Bug reports: https://github.com/sinhrks/ggfortify/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 5.0Mb
ggguitar (0.1.1)
Maintainer: Casimir Saternos cas.saternos@gmail.com
Bug reports: https://github.com/ezgraphs/ggguitar/issues
0 errors | 0 warnings | 0 notes
ggimage (0.0.4)
Maintainer: Guangchuang Yu guangchuangyu@gmail.com
Bug reports: https://github.com/GuangchuangYu/ggimage/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘EBImage’ ‘gridGraphics’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ggplot2 (2.2.1)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/tidyverse/ggplot2/issues
0 errors | 0 warnings | 0 notes
ggpmisc (0.2.14)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/ggpmisc/issues
0 errors | 0 warnings | 0 notes
giphyr (0.1.0)
Maintainer: Hao Zhu haozhu233@gmail.com
Bug reports: https://github.com/haozhu233/giphyr/issues
0 errors | 0 warnings | 0 notes
gitlabr (0.7)
Maintainer: Jirka Lewandowski jirka.lewandowski@wzb.eu
Bug reports: http://gitlab.points-of-interest.cc/points-of-interest/gitlabr/issues/
0 errors | 0 warnings | 0 notes
GSODR (1.0.1)
Maintainer: Adam Sparks adamhsparks@gmail.com
Bug reports: https://github.com/ropensci/GSODR/issues
0 errors | 0 warnings | 0 notes
haven (1.0.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/haven/issues
2 errors | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘haven-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_dta
> ### Title: Read and write Stata DTA files.
> ### Aliases: read_dta read_stata write_dta
>
> ### ** Examples
... 14 lines ...
8 5.0 3.4 1.5 0.2 setosa
9 4.4 2.9 1.4 0.2 setosa
10 4.9 3.1 1.5 0.1 setosa
# ... with 140 more rows
>
> tmp <- tempfile(fileext = ".dta")
> write_dta(mtcars, tmp)
Error in write_dta_(data, normalizePath(path, mustWork = FALSE), version = stata_file_format(version)) :
Writing failure: Unable to write data.
Calls: write_dta -> write_dta_ -> .Call
Execution halted
checking tests ... ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
testthat results ================================================================
OK: 132 SKIPPED: 0 FAILED: 9
1. Error: can roundtrip basic types (@test-write-dta.R#5)
2. Error: can roundtrip missing values (as much as possible) (@test-write-dta.R#12)
3. Error: can roundtrip date times (@test-write-dta.R#23)
4. Error: infinity gets converted to NA (@test-write-dta.R#28)
5. Error: factors become labelleds (@test-write-dta.R#33)
6. Error: labels are preserved (@test-write-dta.R#44)
7. Error: labelleds are round tripped (@test-write-dta.R#52)
8. Error: factors become labelleds (@test-write-dta.R#59)
9. Error: labels are converted to utf-8 (@test-write-dta.R#73)
Error: testthat unit tests failed
Execution halted
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
hddtools (0.6)
Maintainer: Claudia Vitolo cvitolodev@gmail.com
Bug reports: https://github.com/ropensci/hddtools/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [13s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
3: stop(gettextf("unable to find an inherited method for function %s for signature %s",
sQuote(fdef@generic), sQuote(cnames)), domain = NA)
trying URL 'ftp://ftp.bafg.de/pub/REFERATE/GRDC/ltdata/africa.zip'
ftp data connection made, file length 2730333 bytes
==================================================
downloaded 2.6 MB
testthat results ================================================================
OK: 55 SKIPPED: 1 FAILED: 2
1. Error: Test TRMM function using dates in the past (@test-TRMM.R#15)
2. Error: Test TRMM function using 3-hourly dates in the past (@test-TRMM.R#58)
Error: testthat unit tests failed
Execution halted
heemod (0.8.0)
Maintainer: Antoine Filipovic-Pierucci pierucci@gmail.com
Bug reports: https://github.com/pierucci/heemod/issues
1 error | 1 warning | 1 note
checking tests ... ERROR
Running ‘testthat.R’ [32s/36s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
5: as.data.frame(flexsurv::summary.flexsurvreg(x, t = times_surv, type = "cumhaz"))
6: flexsurv::summary.flexsurvreg
7: getExportedValue(pkg, name)
8: stop(gettextf("'%s' is not an exported object from 'namespace:%s'", name, getNamespaceName(ns)),
call. = FALSE, domain = NA)
.model from to prob
1 standard RevisionTHR SuccessfulRevision <NA>
2 new RevisionTHR SuccessfulRevision <NA>
testthat results ================================================================
OK: 346 SKIPPED: 0 FAILED: 1
1. Error: (unknown) (@test_survival.R#23)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
'colour', which will replace the existing scale.
Scale for 'colour' is already present. Adding another scale for
'colour', which will replace the existing scale.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
... 8 lines ...
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Error in mutate_impl(.data, dots) :
'summary.flexsurvreg' is not an exported object from 'namespace:flexsurv'
Quitting from lines 42-83 (j-survival.Rmd)
Error: processing vignette 'j-survival.Rmd' failed with diagnostics:
Error in parameter: p2.
Execution halted
checking dependencies in R code ... NOTE
Missing or unexported object: ‘flexsurv::summary.flexsurvreg’
highcharter (0.5.0)
Maintainer: Joshua Kunst jbkunst@gmail.com
Bug reports: https://github.com/jbkunst/highcharter/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Highcharts (www.highcharts.com) is a Highsoft software product which is
not free for commercial and Governmental use
Quitting from lines 45-46 (charting-data-frames.Rmd)
Error: processing vignette 'charting-data-frames.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
checking installed package size ... NOTE
installed size is 16.5Mb
sub-directories of 1Mb or more:
doc 13.7Mb
htmlwidgets 1.9Mb
hypoparsr (0.1.0)
Maintainer: Hannes Muehleisen hannes@cwi.nl
0 errors | 0 warnings | 0 notes
inferr (0.1.0)
Maintainer: Aravind Hebbali hebbali.aravind@gmail.com
Bug reports: https://github.com/rsquaredacademy/inferr/issues
0 errors | 0 warnings | 0 notes
isdparser (0.2.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/isdparser/issues
0 errors | 0 warnings | 0 notes
jpmesh (0.3.0)
Maintainer: Shinya Uryu suika1127@gmail.com
Bug reports: https://github.com/uribo/jpmesh/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 206.0Mb
sub-directories of 1Mb or more:
extdata 205.2Mb
knitr (1.15.1)
Maintainer: Yihui Xie xie@yihui.name
Bug reports: https://github.com/yihui/knitr/issues
0 errors | 0 warnings | 0 notes
KraljicMatrix (0.1.1)
Maintainer: Bradley Boehmke bradleyboehmke@gmail.com
Bug reports: https://github.com/bradleyboehmke/KraljicMatrix/issues
0 errors | 0 warnings | 0 notes
manifestoR (1.2.3)
Maintainer: Jirka Lewandowski jirka.lewandowski@wzb.eu
Bug reports: https://github.com/ManifestoProject/manifestoR/issues
0 errors | 0 warnings | 0 notes
modelr (0.1.0)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/modelr/issues
0 errors | 0 warnings | 0 notes
modeval (0.1.2)
Maintainer: Younggun You younggun@stanford.edu
0 errors | 0 warnings | 0 notes
monkeylearn (0.1.1)
Maintainer: Maëlle Salmon maelle.salmon@yahoo.se
Bug reports: http://github.com/ropenscilabs/monkeylearn/issues
0 errors | 0 warnings | 0 notes
mregions (0.1.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropenscilabs/mregions/issues
0 errors | 0 warnings | 0 notes
mrgsolve (0.8.6)
Maintainer: Kyle T Baron kyleb@metrumrg.com
Bug reports: https://github.com/metrumresearchgroup/mrgsolve/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 5.0Mb
msgtools (0.2.7)
Maintainer: Thomas J. Leeper thosjleeper@gmail.com
Bug reports: https://github.com/RL10N/msgtools/issues
0 errors | 0 warnings | 0 notes
myTAI (0.5.0)
Maintainer: Hajk-Georg Drost hgd23@cam.ac.uk
Bug reports: https://github.com/HajkD/myTAI/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.3Mb
sub-directories of 1Mb or more:
data 2.0Mb
doc 2.3Mb
natserv (0.1.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/natserv/issues
0 errors | 0 warnings | 0 notes
nycflights13 (0.2.2)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/hadley/nycflights13/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.0Mb
sub-directories of 1Mb or more:
data 6.9Mb
oai (0.2.2)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/oai/issues
0 errors | 0 warnings | 0 notes
observer (0.1.2)
Maintainer: Paul Poncet paulponcet@yahoo.fr
Bug reports: https://github.com/paulponcet/observer/issues
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘validate’
odbc (1.0.1)
Maintainer: Jim Hester james.hester@rstudio.com
Bug reports: https://github.com/rstats-db/odbc/issues
0 errors | 0 warnings | 0 notes
officer (0.1.1)
Maintainer: David Gohel david.gohel@ardata.fr
Bug reports: https://github.com/davidgohel/officer/issues
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘officer-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: slip_in_img
> ### Title: append an image
> ### Aliases: slip_in_img
>
> ### ** Examples
>
> library(magrittr)
> img.file <- file.path( Sys.getenv("R_HOME"), "doc", "html", "logo.jpg" )
> x <- read_docx() %>%
+ body_add_par("R logo: ", style = "Normal") %>%
+ slip_in_img(src = img.file, style = "strong", width = .3, height = .3)
Error: file.exists(src) is not TRUE
Execution halted
checking tests ... ERROR
Running ‘testthat.R’ [20s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
9: ph_with_img(., type = "body", src = img.file, height = 1.06, width = 1.39)
10: external_img(src, width = width, height = height)
11: stopifnot(file.exists(src))
12: stop(sprintf(ngettext(length(r), "%s is not TRUE", "%s are not all TRUE"), ch), call. = FALSE,
domain = NA)
testthat results ================================================================
OK: 317 SKIPPED: 0 FAILED: 4
1. Error: image add (@test-docx-add.R#68)
2. Error: pml fp_border (@test-fp_cell.R#75)
3. Error: css fp_border (@test-fp_cell.R#165)
4. Error: add img into placeholder (@test-pptx-add.R#67)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 181-191 (powerpoint.Rmd)
Error: processing vignette 'powerpoint.Rmd' failed with diagnostics:
file.exists(src) is not TRUE
Execution halted
openadds (0.2.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/sckott/openadds/issues
0 errors | 0 warnings | 0 notes
pangaear (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/pangaear/issues
0 errors | 0 warnings | 0 notes
pdfsearch (0.1.1)
Maintainer: Brandon LeBeau lebebr01+pdfsearch@gmail.com
Bug reports: https://github.com/lebebr01/pdfsearch/issues
0 errors | 0 warnings | 0 notes
photobiologyInOut (0.4.13)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/photobiologyinout/issues/
0 errors | 0 warnings | 0 notes
photobiology (0.9.14)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi
Bug reports: https://bitbucket.org/aphalo/photobiology/issues
0 errors | 0 warnings | 0 notes
phylopath (0.2.3)
Maintainer: Wouter van der Bijl wouter.van.der.bijl@zoologi.su.se
Bug reports: https://github.com/Ax3man/phylopath/issues
0 errors | 0 warnings | 0 notes
plotly (4.5.6)
Maintainer: Carson Sievert cpsievert1@gmail.com
Bug reports: https://github.com/ropensci/plotly/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [44s/45s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
[1] "Running test: plotly-group-within-trace"
[1] "Running test: plotly-alpha-blending"
[1] "Running test: plotly-alpha-no-color"
[1] "Running test: plotly-factor-axis"
[1] "Running test: plotly-character-axis"
[1] "Running test: plotly-histogram"
[1] "Running test: plotly-histogram-vert"
[1] "Running test: plotly-inherit-FALSE"
[1] "Running test: plotly-time-series-summary"
testthat results ================================================================
OK: 813 SKIPPED: 17 FAILED: 1
1. Error: datetimes are converted to e.g. 2013-01-02 05:00:00 (@test-ggplot-date.R#11)
Error: testthat unit tests failed
Execution halted
poio (0.0-3)
Maintainer: Richard Cotton richierocks@gmail.com
Bug reports: https://github.com/RL10N/poio/issues
0 errors | 0 warnings | 0 notes
prcr (0.1.1)
Maintainer: Joshua Rosenberg jmichaelrosenberg@gmail.com
0 errors | 0 warnings | 0 notes
radiant.data (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu
Bug reports: https://github.com/radiant-rstats/radiant.data/issues
0 errors | 0 warnings | 0 notes
randNames (0.2.3)
Maintainer: Karthik Ram karthik.ram@gmail.com
Bug reports: https://github.com/karthik/randNames/issues
0 errors | 0 warnings | 0 notes
rbcb (0.1.0)
Maintainer: Wilson Freitas wilson.freitas@gmail.com
Bug reports: https://github.com/wilsonfreitas/rbcb/issues
0 errors | 0 warnings | 0 notes
rbgm (0.0.4)
Maintainer: Michael D. Sumner mdsumner@gmail.com
Bug reports: https://github.com/AustralianAntarcticDivision/rbgm/issues/
0 errors | 0 warnings | 0 notes
rbhl (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rbhl/issues
0 errors | 0 warnings | 0 notes
rdefra (0.3.4)
Maintainer: Claudia Vitolo cvitolodev@gmail.com
Bug reports: https://github.com/ropensci/rdefra/issues
0 errors | 0 warnings | 0 notes
rdpla (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rdpla/issues
0 errors | 0 warnings | 0 notes
readr (1.1.0)
Maintainer: Jim Hester james.hester@rstudio.com
Bug reports: https://github.com/tidyverse/readr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 12.5Mb
sub-directories of 1Mb or more:
libs 11.9Mb
refimpact (0.1.0)
Maintainer: Perry Stephenson perry.stephenson+cran@gmail.com
Bug reports: https://github.com/perrystephenson/refimpact/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [1s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
7: parseJSON(txt, bigint_as_char) at /tmp/RtmptEsk2b/devtools8d9d52fae03/jsonlite/R/fromJSON.R:115
8: parse_con(txt, bigint_as_char) at /tmp/RtmptEsk2b/devtools8d9d52fae03/jsonlite/R/parseJSON.R:3
9: open(con, "rb") at /tmp/RtmptEsk2b/devtools8d9d52fae03/jsonlite/R/push_parser.R:6
10: open.connection(con, "rb")
testthat results ================================================================
OK: 21 SKIPPED: 0 FAILED: 5
1. Error: get_institutions() returns a tibble (@test_institutions.R#6)
2. Error: Function returns sensible data frames for sensible queries (@test_search_case_studies.R#6)
3. Error: get_tag_types() returns a tibble (@test_tag_types.R#6)
4. Error: get_tag_value() returns a tibble (@test_tag_values.R#6)
5. Error: get_units_of_assessment() returns a tibble (@test_units_of_assessment.R#6)
Error: testthat unit tests failed
Execution halted
reutils (0.2.3)
Maintainer: Gerhard Schöfl gerhard.schofl@gmail.com
Bug reports: https://github.com/gschofl/reutils/issues
0 errors | 0 warnings | 0 notes
rgbif (0.9.7)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rgbif/issues
0 errors | 0 warnings | 0 notes
rgho (1.0.1)
Maintainer: Antoine Filipovic-Pierucci pierucci@gmail.com
Bug reports: https://github.com/pierucci/rgho/issues
0 errors | 0 warnings | 0 notes
riem (0.1.1)
Maintainer: Maëlle Salmon maelle.salmon@yahoo.se
Bug reports: http://github.com/ropenscilabs/riem/issues
0 errors | 0 warnings | 0 notes
rif (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus+r@gmail.com
Bug reports: https://github.com/ropensci/rif/issues
0 errors | 0 warnings | 0 notes
ritis (0.5.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/ritis/issues
0 errors | 0 warnings | 0 notes
rmarkdown (1.4)
Maintainer: JJ Allaire jj@rstudio.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 6.6Mb
sub-directories of 1Mb or more:
rmd 6.1Mb
rnoaa (0.6.6)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rnoaa/issues
0 errors | 0 warnings | 0 notes
rorcid (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/rorcid/issues
0 errors | 0 warnings | 0 notes
rtide (0.0.3)
Maintainer: Joe Thorley joe@poissonconsulting.ca
Bug reports: https://github.com/poissonconsulting/rtide/issues
0 errors | 0 warnings | 0 notes
sf (0.4-1)
Maintainer: Edzer Pebesma edzer.pebesma@uni-muenster.de
Bug reports: https://github.com/edzer/sfr/issues/
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 10.2Mb
sub-directories of 1Mb or more:
doc 4.0Mb
libs 4.2Mb
sjmisc (2.3.1)
Maintainer: Daniel Lüdecke d.luedecke@uke.de
Bug reports: https://github.com/sjPlot/sjmisc/issues
0 errors | 0 warnings | 0 notes
sjPlot (2.3.1)
Maintainer: Daniel Lüdecke d.luedecke@uke.de
Bug reports: https://github.com/sjPlot/devel/issues
0 errors | 0 warnings | 0 notes
sjstats (0.9.0)
Maintainer: Daniel Lüdecke d.luedecke@uke.de
Bug reports: https://github.com/sjPlot/sjstats/issues
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘piecewiseSEM’
solrium (0.4.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: http://www.github.com/ropensci/solrium/issues
0 errors | 0 warnings | 0 notes
spbabel (0.4.5)
Maintainer: Michael D. Sumner mdsumner@gmail.com
Bug reports: https://github.com/mdsumner/spbabel/issues
0 errors | 0 warnings | 0 notes
spdplyr (0.1.2)
Maintainer: Michael D. Sumner mdsumner@gmail.com
Bug reports: https://github.com/mdsumner/spdplyr/issues
0 errors | 0 warnings | 0 notes
spocc (0.6.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/spocc/issues
0 errors | 0 warnings | 0 notes
srvyr (0.2.0)
Maintainer: Greg Freedman Ellis greg.freedman@gmail.com
Bug reports: https://github.com/gergness/srvyr/issues
0 errors | 0 warnings | 0 notes
taxize (0.8.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/taxize/issues
0 errors | 0 warnings | 0 notes
tidyquant (0.4.0)
Maintainer: Matt Dancho mdancho@business-science.io
Bug reports: https://github.com/mdancho84/tidyquant/issues
0 errors | 0 warnings | 0 notes
tidyr (0.6.1)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/tidyverse/tidyr/issues
0 errors | 0 warnings | 0 notes
tidyverse (1.1.1)
Maintainer: Hadley Wickham hadley@rstudio.com
Bug reports: https://github.com/tidyverse/tidyverse/issues
0 errors | 0 warnings | 0 notes
units (0.4-3)
Maintainer: Edzer Pebesma edzer.pebesma@uni-muenster.de
Bug reports: https://github.com/edzer/units/issues/
0 errors | 0 warnings | 0 notes
unpivotr (0.1.0)
Maintainer: Duncan Garmonsway nacnudus@gmail.com
Bug reports: https://github.com/nacnudus/unpivotr/issues
0 errors | 0 warnings | 0 notes
valr (0.1.2)
Maintainer: Jay Hesselberth jay.hesselberth@gmail.com
Bug reports: https://github.com/rnabioco/valr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 12.5Mb
sub-directories of 1Mb or more:
libs 11.5Mb
wand (0.2.0)
Maintainer: Bob Rudis bob@rud.is
Bug reports: https://github.com/hrbrmstr/wand/issues
0 errors | 0 warnings | 0 notes
worrms (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com
Bug reports: https://github.com/ropensci/worrms/issues
0 errors | 0 warnings | 0 notes
Robertus100/tibble documentation built on May 9, 2019, 10:09 a.m.
R Package Documentation
Browse R Packages
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Setup
Platform
|setting |value | |:--------|:----------------------------| |version |R version 3.3.3 (2017-03-06) | |system |x86_64, linux-gnu | |ui |X11 | |language |(EN) | |collate |en_US.UTF-8 | |tz |Zulu | |date |2017-03-31 |
Packages
|package |* |version |date |source | |:--------------|:--|:----------|:----------|:--------------------------------| |assertthat | |0.1 |2013-12-06 |cran (@0.1) | |knitr | |1.15.1 |2016-11-22 |cran (@1.15.1) | |lazyeval | |0.2.0 |2016-06-12 |cran (@0.2.0) | |microbenchmark | |1.4-2.1 |2015-11-25 |cran (@1.4-2.1) | |nycflights13 | |0.2.2 |2017-01-27 |cran (@0.2.2) | |Rcpp | |0.12.10 |2017-03-31 |Github (RcppCore/Rcpp@886f5df) | |rmarkdown | |1.4 |2017-03-24 |cran (@1.4) | |testthat | |1.0.2.9000 |2017-02-27 |Github (hadley/testthat@b72a228) | |tibble | |1.2 |2016-08-26 |cran (@1.2) | |withr | |1.0.2 |2016-06-20 |CRAN (R 3.3.1) |
Check results
118 packages
|package |version | errors| warnings| notes| |:-----------------|:-------|------:|--------:|-----:| |abjutils |0.0.1 | 0| 0| 0| |anomalyDetection |0.1.1 | 0| 0| 0| |biomartr |0.4.0 | 0| 0| 0| |blkbox |1.0 | 0| 0| 2| |blob |1.0.0 | 0| 0| 0| |blockTools |0.6-3 | 0| 0| 0| |bold |0.4.0 | 0| 0| 1| |bsam |1.1.1 | 0| 0| 0| |ccafs |0.1.0 | 0| 0| 0| |cdata |0.1.0 | 0| 0| 0| |cellranger |1.1.0 | 0| 0| 0| |checkmate |1.8.2 | 0| 0| 0| |corrr |0.2.1 | 0| 0| 0| |countyweather |0.1.0 | 0| 0| 0| |cpr |0.2.3 | 0| 0| 0| |datapasta |2.0.0 | 0| 0| 0| |datastepr |0.0.2 | 0| 0| 0| |dat |0.1.0 | 1| 0| 0| |DiagrammeR |0.9.0 | 0| 0| 1| |doctr |0.2.0 | 0| 0| 0| |docxtractr |0.2.0 | 0| 0| 0| |dotwhisker |0.2.3 | 0| 0| 0| |dplyr |0.5.0 | 0| 0| 1| |easyformatr |0.1.2 | 0| 0| 0| |ecoseries |0.1.1 | 0| 0| 0| |enigma |0.3.0 | 0| 0| 0| |eurostat |3.1.1 | 0| 0| 0| |evaluator |0.1.0 | 0| 0| 0| |fbar |0.1.23 | 0| 0| 0| |feather |0.3.1 | 0| 0| 0| |fileplyr |0.2.0 | 0| 0| 0| |filesstrings |0.3.2 | 0| 0| 0| |flextable |0.1.0 | 0| 1| 0| |foghorn |0.4.2 | 0| 0| 0| |forcats |0.2.0 | 0| 0| 0| |FSelectorRcpp |0.1.2 | 1| 0| 2| |geojson |0.1.2 | 0| 0| 0| |getlandsat |0.1.0 | 0| 0| 0| |ggalt |0.4.0 | 0| 0| 0| |ggenealogy |0.3.0 | 0| 0| 0| |ggfortify |0.4.1 | 0| 0| 1| |ggguitar |0.1.1 | 0| 0| 0| |ggimage |0.0.4 | 1| 0| 0| |ggplot2 |2.2.1 | 0| 0| 0| |ggpmisc |0.2.14 | 0| 0| 0| |giphyr |0.1.0 | 0| 0| 0| |gitlabr |0.7 | 0| 0| 0| |GSODR |1.0.1 | 0| 0| 0| |haven |1.0.0 | 2| 0| 1| |hddtools |0.6 | 1| 0| 0| |heemod |0.8.0 | 1| 1| 1| |highcharter |0.5.0 | 0| 1| 1| |hypoparsr |0.1.0 | 0| 0| 0| |inferr |0.1.0 | 0| 0| 0| |isdparser |0.2.0 | 0| 0| 0| |jpmesh |0.3.0 | 0| 0| 1| |knitr |1.15.1 | 0| 0| 0| |KraljicMatrix |0.1.1 | 0| 0| 0| |manifestoR |1.2.3 | 0| 0| 0| |modelr |0.1.0 | 0| 0| 0| |modeval |0.1.2 | 0| 0| 0| |monkeylearn |0.1.1 | 0| 0| 0| |mregions |0.1.4 | 0| 0| 0| |mrgsolve |0.8.6 | 0| 0| 1| |msgtools |0.2.7 | 0| 0| 0| |myTAI |0.5.0 | 0| 0| 1| |natserv |0.1.4 | 0| 0| 0| |nycflights13 |0.2.2 | 0| 0| 1| |oai |0.2.2 | 0| 0| 0| |observer |0.1.2 | 0| 0| 1| |odbc |1.0.1 | 0| 0| 0| |officer |0.1.1 | 2| 1| 0| |openadds |0.2.0 | 0| 0| 0| |pangaear |0.3.0 | 0| 0| 0| |pdfsearch |0.1.1 | 0| 0| 0| |photobiologyInOut |0.4.13 | 0| 0| 0| |photobiology |0.9.14 | 0| 0| 0| |phylopath |0.2.3 | 0| 0| 0| |plotly |4.5.6 | 1| 0| 0| |poio |0.0-3 | 0| 0| 0| |prcr |0.1.1 | 0| 0| 0| |radiant.data |0.6.0 | 0| 0| 0| |randNames |0.2.3 | 0| 0| 0| |rbcb |0.1.0 | 0| 0| 0| |rbgm |0.0.4 | 0| 0| 0| |rbhl |0.3.0 | 0| 0| 0| |rdefra |0.3.4 | 0| 0| 0| |rdpla |0.1.0 | 0| 0| 0| |readr |1.1.0 | 0| 0| 1| |refimpact |0.1.0 | 1| 0| 0| |reutils |0.2.3 | 0| 0| 0| |rgbif |0.9.7 | 0| 0| 0| |rgho |1.0.1 | 0| 0| 0| |riem |0.1.1 | 0| 0| 0| |rif |0.1.0 | 0| 0| 0| |ritis |0.5.4 | 0| 0| 0| |rmarkdown |1.4 | 0| 0| 1| |rnoaa |0.6.6 | 0| 0| 0| |rorcid |0.3.0 | 0| 0| 0| |rtide |0.0.3 | 0| 0| 0| |sf |0.4-1 | 0| 0| 1| |sjmisc |2.3.1 | 0| 0| 0| |sjPlot |2.3.1 | 0| 0| 0| |sjstats |0.9.0 | 0| 0| 1| |solrium |0.4.0 | 0| 0| 0| |spbabel |0.4.5 | 0| 0| 0| |spdplyr |0.1.2 | 0| 0| 0| |spocc |0.6.0 | 0| 0| 0| |srvyr |0.2.0 | 0| 0| 0| |taxize |0.8.4 | 0| 0| 0| |tidyquant |0.4.0 | 0| 0| 0| |tidyr |0.6.1 | 0| 0| 0| |tidyverse |1.1.1 | 0| 0| 0| |units |0.4-3 | 0| 0| 0| |unpivotr |0.1.0 | 0| 0| 0| |valr |0.1.2 | 0| 0| 1| |wand |0.2.0 | 0| 0| 0| |worrms |0.1.0 | 0| 0| 0|
abjutils (0.0.1)
Maintainer: Fernando Correa fcorrea@abj.org.br
0 errors | 0 warnings | 0 notes
anomalyDetection (0.1.1)
Maintainer: Bradley Boehmke bradleyboehmke@gmail.com Bug reports: https://github.com/bradleyboehmke/anomalyDetection/issues
0 errors | 0 warnings | 0 notes
biomartr (0.4.0)
Maintainer: Hajk-Georg Drost hgd23@cam.ac.uk Bug reports: https://github.com/HajkD/biomartr/issues
0 errors | 0 warnings | 0 notes
blkbox (1.0)
Maintainer: Boris Guennewig b.guennewig@garvan.org.au
0 errors | 0 warnings | 2 notes
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘bigrf’
checking dependencies in R code ... NOTE
Missing or unexported object: ‘xgboost::predict’
blob (1.0.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/blob/issues
0 errors | 0 warnings | 0 notes
blockTools (0.6-3)
Maintainer: Ryan T. Moore rtm@american.edu
0 errors | 0 warnings | 0 notes
bold (0.4.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/bold/issues
0 errors | 0 warnings | 1 note
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘sangerseqR’
bsam (1.1.1)
Maintainer: Ian Jonsen ian.jonsen@mq.edu.au Bug reports: https://github.com/ianjonsen/bsam/issues
0 errors | 0 warnings | 0 notes
ccafs (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/ccafs/issues
0 errors | 0 warnings | 0 notes
cdata (0.1.0)
Maintainer: John Mount jmount@win-vector.com Bug reports: https://github.com/WinVector/cdata/issues
0 errors | 0 warnings | 0 notes
cellranger (1.1.0)
Maintainer: Jennifer Bryan jenny@stat.ubc.ca Bug reports: https://github.com/rsheets/cellranger/issues
0 errors | 0 warnings | 0 notes
checkmate (1.8.2)
Maintainer: Michel Lang michellang@gmail.com Bug reports: https://github.com/mllg/checkmate/issues
0 errors | 0 warnings | 0 notes
corrr (0.2.1)
Maintainer: Simon Jackson drsimonjackson@gmail.com Bug reports: https://github.com/drsimonj/corrr/issues
0 errors | 0 warnings | 0 notes
countyweather (0.1.0)
Maintainer: Rachel Severson rachel.severson@colostate.edu
0 errors | 0 warnings | 0 notes
cpr (0.2.3)
Maintainer: Peter DeWitt dewittpe@gmail.com
0 errors | 0 warnings | 0 notes
datapasta (2.0.0)
Maintainer: Miles McBain miles.mcbain@gmail.com Bug reports: https://github.com/milesmcbain/datapasta/issues
0 errors | 0 warnings | 0 notes
datastepr (0.0.2)
Maintainer: Brandon Taylor brandon.taylor221@gmail.com Bug reports: https://github.com/bramtayl/datastepr/issues
0 errors | 0 warnings | 0 notes
dat (0.1.0)
Maintainer: Sebastian Warnholz wahani@gmail.com Bug reports: https://github.com/wahani/dat/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [10s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
^
tests/testthat/test-trunc-mat.R:5:3: style: Variable and function names should not be longer than 25 characters.
print_arg_names_without_ellipsis <- setdiff(print_arg_names, "...")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tests/testthat/test-trunc-mat.R:9:16: style: Variable and function names should not be longer than 25 characters.
expect_equal(print_arg_names_without_ellipsis, trunc_mat_arg_names)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
testthat results ================================================================
OK: 107 SKIPPED: 0 FAILED: 1
1. Failure: Package Style (@test-lintr.R#5)
Error: testthat unit tests failed
Execution halted
DiagrammeR (0.9.0)
Maintainer: Richard Iannone riannone@me.com Bug reports: https://github.com/rich-iannone/DiagrammeR/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 10.6Mb
sub-directories of 1Mb or more:
extdata 2.4Mb
htmlwidgets 4.7Mb
img 2.8Mb
doctr (0.2.0)
Maintainer: Caio Lente me@ctlente.com
0 errors | 0 warnings | 0 notes
docxtractr (0.2.0)
Maintainer: Bob Rudis bob@rudis.net
0 errors | 0 warnings | 0 notes
dotwhisker (0.2.3)
Maintainer: Yue Hu yue-hu-1@uiowa.edu Bug reports: https://github.com/fsolt/dotwhisker/issues
0 errors | 0 warnings | 0 notes
dplyr (0.5.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/dplyr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 23.5Mb
sub-directories of 1Mb or more:
libs 21.4Mb
easyformatr (0.1.2)
Maintainer: Brandon Taylor brandon.taylor221@gmail.com Bug reports: https://github.com/bramtayl/easyformatr/issues
0 errors | 0 warnings | 0 notes
ecoseries (0.1.1)
Maintainer: Fernando Teixeira fernando.teixeira@fgv.br Bug reports: https://github.com/fernote7/ecoseries/issues
0 errors | 0 warnings | 0 notes
enigma (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropengov/enigma/issues
0 errors | 0 warnings | 0 notes
eurostat (3.1.1)
Maintainer: Leo Lahti leo.lahti@iki.fi Bug reports: https://github.com/ropengov/eurostat/issues
0 errors | 0 warnings | 0 notes
evaluator (0.1.0)
Maintainer: David Severski davidski@deadheaven.com Bug reports: https://github.com/davidski/evaluator/issues
0 errors | 0 warnings | 0 notes
fbar (0.1.23)
Maintainer: Max Conway conway.max1@gmail.com
0 errors | 0 warnings | 0 notes
feather (0.3.1)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/wesm/feather/issues
0 errors | 0 warnings | 0 notes
fileplyr (0.2.0)
Maintainer: KS Srikanth sri.teach@gmail.com Bug reports: https://github.com/talegari/fileplyr/issues
0 errors | 0 warnings | 0 notes
filesstrings (0.3.2)
Maintainer: Rory Nolan rorynoolan@gmail.com Bug reports: https://www.github.com/rorynolan/filesstrings/issues
0 errors | 0 warnings | 0 notes
flextable (0.1.0)
Maintainer: David Gohel david.gohel@ardata.fr
0 errors | 1 warning | 0 notes
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: officer
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
Quitting from lines 39-41 (format.Rmd)
Error: processing vignette 'format.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
foghorn (0.4.2)
Maintainer: Francois Michonneau francois.michonneau@gmail.com Bug reports: https://github.com/fmichonneau/foghorn/issues
0 errors | 0 warnings | 0 notes
forcats (0.2.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/tidyverse/forcats/issues
0 errors | 0 warnings | 0 notes
FSelectorRcpp (0.1.2)
Maintainer: Zygmunt Zawadzki zygmunt@zstat.pl Bug reports: https://github.com/mi2-warsaw/FSelectorRcpp/issues
1 error | 0 warnings | 2 notes
checking examples ... ERROR
Running examples in ‘FSelectorRcpp-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: feature_search
> ### Title: General Feature Searching Engine
> ### Aliases: feature_search
>
> ### ** Examples
>
>
> # Enable parallelization in examples
> library(doSNOW) # doSNOW has an option for progress bar
Loading required package: foreach
Loading required package: iterators
Loading required package: snow
> cl <- makeCluster(2)
Loading required namespace: Rmpi
Error in Rmpi::mpi.comm.spawn(slave = mpitask, slavearg = args, nslaves = count, :
MPI_Comm_spawn is not supported.
Calls: makeCluster -> makeMPIcluster -> <Anonymous>
Execution halted
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘RTCGA.rnaseq’
checking installed package size ... NOTE
installed size is 9.7Mb
sub-directories of 1Mb or more:
doc 2.2Mb
libs 7.3Mb
geojson (0.1.2)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/geojson/issues
0 errors | 0 warnings | 0 notes
getlandsat (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropenscilabs/getlandsat/issues
0 errors | 0 warnings | 0 notes
ggalt (0.4.0)
Maintainer: Bob Rudis bob@rud.is Bug reports: https://github.com/hrbrmstr/ggalt/issues
0 errors | 0 warnings | 0 notes
ggenealogy (0.3.0)
Maintainer: Lindsay Rutter lrutter@iastate.edu
0 errors | 0 warnings | 0 notes
ggfortify (0.4.1)
Maintainer: Masaaki Horikoshi sinhrks@gmail.com Bug reports: https://github.com/sinhrks/ggfortify/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 5.0Mb
ggguitar (0.1.1)
Maintainer: Casimir Saternos cas.saternos@gmail.com Bug reports: https://github.com/ezgraphs/ggguitar/issues
0 errors | 0 warnings | 0 notes
ggimage (0.0.4)
Maintainer: Guangchuang Yu guangchuangyu@gmail.com Bug reports: https://github.com/GuangchuangYu/ggimage/issues
1 error | 0 warnings | 0 notes
checking package dependencies ... ERROR
Packages required but not available: ‘EBImage’ ‘gridGraphics’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ggplot2 (2.2.1)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/tidyverse/ggplot2/issues
0 errors | 0 warnings | 0 notes
ggpmisc (0.2.14)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/ggpmisc/issues
0 errors | 0 warnings | 0 notes
giphyr (0.1.0)
Maintainer: Hao Zhu haozhu233@gmail.com Bug reports: https://github.com/haozhu233/giphyr/issues
0 errors | 0 warnings | 0 notes
gitlabr (0.7)
Maintainer: Jirka Lewandowski jirka.lewandowski@wzb.eu Bug reports: http://gitlab.points-of-interest.cc/points-of-interest/gitlabr/issues/
0 errors | 0 warnings | 0 notes
GSODR (1.0.1)
Maintainer: Adam Sparks adamhsparks@gmail.com Bug reports: https://github.com/ropensci/GSODR/issues
0 errors | 0 warnings | 0 notes
haven (1.0.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/haven/issues
2 errors | 0 warnings | 1 note
checking examples ... ERROR
Running examples in ‘haven-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_dta
> ### Title: Read and write Stata DTA files.
> ### Aliases: read_dta read_stata write_dta
>
> ### ** Examples
... 14 lines ...
8 5.0 3.4 1.5 0.2 setosa
9 4.4 2.9 1.4 0.2 setosa
10 4.9 3.1 1.5 0.1 setosa
# ... with 140 more rows
>
> tmp <- tempfile(fileext = ".dta")
> write_dta(mtcars, tmp)
Error in write_dta_(data, normalizePath(path, mustWork = FALSE), version = stata_file_format(version)) :
Writing failure: Unable to write data.
Calls: write_dta -> write_dta_ -> .Call
Execution halted
checking tests ... ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
testthat results ================================================================
OK: 132 SKIPPED: 0 FAILED: 9
1. Error: can roundtrip basic types (@test-write-dta.R#5)
2. Error: can roundtrip missing values (as much as possible) (@test-write-dta.R#12)
3. Error: can roundtrip date times (@test-write-dta.R#23)
4. Error: infinity gets converted to NA (@test-write-dta.R#28)
5. Error: factors become labelleds (@test-write-dta.R#33)
6. Error: labels are preserved (@test-write-dta.R#44)
7. Error: labelleds are round tripped (@test-write-dta.R#52)
8. Error: factors become labelleds (@test-write-dta.R#59)
9. Error: labels are converted to utf-8 (@test-write-dta.R#73)
Error: testthat unit tests failed
Execution halted
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
hddtools (0.6)
Maintainer: Claudia Vitolo cvitolodev@gmail.com Bug reports: https://github.com/ropensci/hddtools/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [13s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
3: stop(gettextf("unable to find an inherited method for function %s for signature %s",
sQuote(fdef@generic), sQuote(cnames)), domain = NA)
trying URL 'ftp://ftp.bafg.de/pub/REFERATE/GRDC/ltdata/africa.zip'
ftp data connection made, file length 2730333 bytes
==================================================
downloaded 2.6 MB
testthat results ================================================================
OK: 55 SKIPPED: 1 FAILED: 2
1. Error: Test TRMM function using dates in the past (@test-TRMM.R#15)
2. Error: Test TRMM function using 3-hourly dates in the past (@test-TRMM.R#58)
Error: testthat unit tests failed
Execution halted
heemod (0.8.0)
Maintainer: Antoine Filipovic-Pierucci pierucci@gmail.com Bug reports: https://github.com/pierucci/heemod/issues
1 error | 1 warning | 1 note
checking tests ... ERROR
Running ‘testthat.R’ [32s/36s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
5: as.data.frame(flexsurv::summary.flexsurvreg(x, t = times_surv, type = "cumhaz"))
6: flexsurv::summary.flexsurvreg
7: getExportedValue(pkg, name)
8: stop(gettextf("'%s' is not an exported object from 'namespace:%s'", name, getNamespaceName(ns)),
call. = FALSE, domain = NA)
.model from to prob
1 standard RevisionTHR SuccessfulRevision <NA>
2 new RevisionTHR SuccessfulRevision <NA>
testthat results ================================================================
OK: 346 SKIPPED: 0 FAILED: 1
1. Error: (unknown) (@test_survival.R#23)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
'colour', which will replace the existing scale.
Scale for 'colour' is already present. Adding another scale for
'colour', which will replace the existing scale.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
... 8 lines ...
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Error in mutate_impl(.data, dots) :
'summary.flexsurvreg' is not an exported object from 'namespace:flexsurv'
Quitting from lines 42-83 (j-survival.Rmd)
Error: processing vignette 'j-survival.Rmd' failed with diagnostics:
Error in parameter: p2.
Execution halted
checking dependencies in R code ... NOTE
Missing or unexported object: ‘flexsurv::summary.flexsurvreg’
highcharter (0.5.0)
Maintainer: Joshua Kunst jbkunst@gmail.com Bug reports: https://github.com/jbkunst/highcharter/issues
0 errors | 1 warning | 1 note
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Highcharts (www.highcharts.com) is a Highsoft software product which is
not free for commercial and Governmental use
Quitting from lines 45-46 (charting-data-frames.Rmd)
Error: processing vignette 'charting-data-frames.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
checking installed package size ... NOTE
installed size is 16.5Mb
sub-directories of 1Mb or more:
doc 13.7Mb
htmlwidgets 1.9Mb
hypoparsr (0.1.0)
Maintainer: Hannes Muehleisen hannes@cwi.nl
0 errors | 0 warnings | 0 notes
inferr (0.1.0)
Maintainer: Aravind Hebbali hebbali.aravind@gmail.com Bug reports: https://github.com/rsquaredacademy/inferr/issues
0 errors | 0 warnings | 0 notes
isdparser (0.2.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/isdparser/issues
0 errors | 0 warnings | 0 notes
jpmesh (0.3.0)
Maintainer: Shinya Uryu suika1127@gmail.com Bug reports: https://github.com/uribo/jpmesh/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 206.0Mb
sub-directories of 1Mb or more:
extdata 205.2Mb
knitr (1.15.1)
Maintainer: Yihui Xie xie@yihui.name Bug reports: https://github.com/yihui/knitr/issues
0 errors | 0 warnings | 0 notes
KraljicMatrix (0.1.1)
Maintainer: Bradley Boehmke bradleyboehmke@gmail.com Bug reports: https://github.com/bradleyboehmke/KraljicMatrix/issues
0 errors | 0 warnings | 0 notes
manifestoR (1.2.3)
Maintainer: Jirka Lewandowski jirka.lewandowski@wzb.eu Bug reports: https://github.com/ManifestoProject/manifestoR/issues
0 errors | 0 warnings | 0 notes
modelr (0.1.0)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/modelr/issues
0 errors | 0 warnings | 0 notes
modeval (0.1.2)
Maintainer: Younggun You younggun@stanford.edu
0 errors | 0 warnings | 0 notes
monkeylearn (0.1.1)
Maintainer: Maëlle Salmon maelle.salmon@yahoo.se Bug reports: http://github.com/ropenscilabs/monkeylearn/issues
0 errors | 0 warnings | 0 notes
mregions (0.1.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropenscilabs/mregions/issues
0 errors | 0 warnings | 0 notes
mrgsolve (0.8.6)
Maintainer: Kyle T Baron kyleb@metrumrg.com Bug reports: https://github.com/metrumresearchgroup/mrgsolve/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 5.0Mb
msgtools (0.2.7)
Maintainer: Thomas J. Leeper thosjleeper@gmail.com Bug reports: https://github.com/RL10N/msgtools/issues
0 errors | 0 warnings | 0 notes
myTAI (0.5.0)
Maintainer: Hajk-Georg Drost hgd23@cam.ac.uk Bug reports: https://github.com/HajkD/myTAI/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 5.3Mb
sub-directories of 1Mb or more:
data 2.0Mb
doc 2.3Mb
natserv (0.1.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/natserv/issues
0 errors | 0 warnings | 0 notes
nycflights13 (0.2.2)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/hadley/nycflights13/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 7.0Mb
sub-directories of 1Mb or more:
data 6.9Mb
oai (0.2.2)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/oai/issues
0 errors | 0 warnings | 0 notes
observer (0.1.2)
Maintainer: Paul Poncet paulponcet@yahoo.fr Bug reports: https://github.com/paulponcet/observer/issues
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘validate’
odbc (1.0.1)
Maintainer: Jim Hester james.hester@rstudio.com Bug reports: https://github.com/rstats-db/odbc/issues
0 errors | 0 warnings | 0 notes
officer (0.1.1)
Maintainer: David Gohel david.gohel@ardata.fr Bug reports: https://github.com/davidgohel/officer/issues
2 errors | 1 warning | 0 notes
checking examples ... ERROR
Running examples in ‘officer-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: slip_in_img
> ### Title: append an image
> ### Aliases: slip_in_img
>
> ### ** Examples
>
> library(magrittr)
> img.file <- file.path( Sys.getenv("R_HOME"), "doc", "html", "logo.jpg" )
> x <- read_docx() %>%
+ body_add_par("R logo: ", style = "Normal") %>%
+ slip_in_img(src = img.file, style = "strong", width = .3, height = .3)
Error: file.exists(src) is not TRUE
Execution halted
checking tests ... ERROR
Running ‘testthat.R’ [20s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
9: ph_with_img(., type = "body", src = img.file, height = 1.06, width = 1.39)
10: external_img(src, width = width, height = height)
11: stopifnot(file.exists(src))
12: stop(sprintf(ngettext(length(r), "%s is not TRUE", "%s are not all TRUE"), ch), call. = FALSE,
domain = NA)
testthat results ================================================================
OK: 317 SKIPPED: 0 FAILED: 4
1. Error: image add (@test-docx-add.R#68)
2. Error: pml fp_border (@test-fp_cell.R#75)
3. Error: css fp_border (@test-fp_cell.R#165)
4. Error: add img into placeholder (@test-pptx-add.R#67)
Error: testthat unit tests failed
Execution halted
checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 181-191 (powerpoint.Rmd)
Error: processing vignette 'powerpoint.Rmd' failed with diagnostics:
file.exists(src) is not TRUE
Execution halted
openadds (0.2.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/sckott/openadds/issues
0 errors | 0 warnings | 0 notes
pangaear (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/pangaear/issues
0 errors | 0 warnings | 0 notes
pdfsearch (0.1.1)
Maintainer: Brandon LeBeau lebebr01+pdfsearch@gmail.com Bug reports: https://github.com/lebebr01/pdfsearch/issues
0 errors | 0 warnings | 0 notes
photobiologyInOut (0.4.13)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/photobiologyinout/issues/
0 errors | 0 warnings | 0 notes
photobiology (0.9.14)
Maintainer: Pedro J. Aphalo pedro.aphalo@helsinki.fi Bug reports: https://bitbucket.org/aphalo/photobiology/issues
0 errors | 0 warnings | 0 notes
phylopath (0.2.3)
Maintainer: Wouter van der Bijl wouter.van.der.bijl@zoologi.su.se Bug reports: https://github.com/Ax3man/phylopath/issues
0 errors | 0 warnings | 0 notes
plotly (4.5.6)
Maintainer: Carson Sievert cpsievert1@gmail.com Bug reports: https://github.com/ropensci/plotly/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [44s/45s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
[1] "Running test: plotly-group-within-trace"
[1] "Running test: plotly-alpha-blending"
[1] "Running test: plotly-alpha-no-color"
[1] "Running test: plotly-factor-axis"
[1] "Running test: plotly-character-axis"
[1] "Running test: plotly-histogram"
[1] "Running test: plotly-histogram-vert"
[1] "Running test: plotly-inherit-FALSE"
[1] "Running test: plotly-time-series-summary"
testthat results ================================================================
OK: 813 SKIPPED: 17 FAILED: 1
1. Error: datetimes are converted to e.g. 2013-01-02 05:00:00 (@test-ggplot-date.R#11)
Error: testthat unit tests failed
Execution halted
poio (0.0-3)
Maintainer: Richard Cotton richierocks@gmail.com Bug reports: https://github.com/RL10N/poio/issues
0 errors | 0 warnings | 0 notes
prcr (0.1.1)
Maintainer: Joshua Rosenberg jmichaelrosenberg@gmail.com
0 errors | 0 warnings | 0 notes
radiant.data (0.6.0)
Maintainer: Vincent Nijs radiant@rady.ucsd.edu Bug reports: https://github.com/radiant-rstats/radiant.data/issues
0 errors | 0 warnings | 0 notes
randNames (0.2.3)
Maintainer: Karthik Ram karthik.ram@gmail.com Bug reports: https://github.com/karthik/randNames/issues
0 errors | 0 warnings | 0 notes
rbcb (0.1.0)
Maintainer: Wilson Freitas wilson.freitas@gmail.com Bug reports: https://github.com/wilsonfreitas/rbcb/issues
0 errors | 0 warnings | 0 notes
rbgm (0.0.4)
Maintainer: Michael D. Sumner mdsumner@gmail.com Bug reports: https://github.com/AustralianAntarcticDivision/rbgm/issues/
0 errors | 0 warnings | 0 notes
rbhl (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rbhl/issues
0 errors | 0 warnings | 0 notes
rdefra (0.3.4)
Maintainer: Claudia Vitolo cvitolodev@gmail.com Bug reports: https://github.com/ropensci/rdefra/issues
0 errors | 0 warnings | 0 notes
rdpla (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rdpla/issues
0 errors | 0 warnings | 0 notes
readr (1.1.0)
Maintainer: Jim Hester james.hester@rstudio.com Bug reports: https://github.com/tidyverse/readr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 12.5Mb
sub-directories of 1Mb or more:
libs 11.9Mb
refimpact (0.1.0)
Maintainer: Perry Stephenson perry.stephenson+cran@gmail.com Bug reports: https://github.com/perrystephenson/refimpact/issues
1 error | 0 warnings | 0 notes
checking tests ... ERROR
Running ‘testthat.R’ [1s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
7: parseJSON(txt, bigint_as_char) at /tmp/RtmptEsk2b/devtools8d9d52fae03/jsonlite/R/fromJSON.R:115
8: parse_con(txt, bigint_as_char) at /tmp/RtmptEsk2b/devtools8d9d52fae03/jsonlite/R/parseJSON.R:3
9: open(con, "rb") at /tmp/RtmptEsk2b/devtools8d9d52fae03/jsonlite/R/push_parser.R:6
10: open.connection(con, "rb")
testthat results ================================================================
OK: 21 SKIPPED: 0 FAILED: 5
1. Error: get_institutions() returns a tibble (@test_institutions.R#6)
2. Error: Function returns sensible data frames for sensible queries (@test_search_case_studies.R#6)
3. Error: get_tag_types() returns a tibble (@test_tag_types.R#6)
4. Error: get_tag_value() returns a tibble (@test_tag_values.R#6)
5. Error: get_units_of_assessment() returns a tibble (@test_units_of_assessment.R#6)
Error: testthat unit tests failed
Execution halted
reutils (0.2.3)
Maintainer: Gerhard Schöfl gerhard.schofl@gmail.com Bug reports: https://github.com/gschofl/reutils/issues
0 errors | 0 warnings | 0 notes
rgbif (0.9.7)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rgbif/issues
0 errors | 0 warnings | 0 notes
rgho (1.0.1)
Maintainer: Antoine Filipovic-Pierucci pierucci@gmail.com Bug reports: https://github.com/pierucci/rgho/issues
0 errors | 0 warnings | 0 notes
riem (0.1.1)
Maintainer: Maëlle Salmon maelle.salmon@yahoo.se Bug reports: http://github.com/ropenscilabs/riem/issues
0 errors | 0 warnings | 0 notes
rif (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus+r@gmail.com Bug reports: https://github.com/ropensci/rif/issues
0 errors | 0 warnings | 0 notes
ritis (0.5.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/ritis/issues
0 errors | 0 warnings | 0 notes
rmarkdown (1.4)
Maintainer: JJ Allaire jj@rstudio.com
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 6.6Mb
sub-directories of 1Mb or more:
rmd 6.1Mb
rnoaa (0.6.6)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rnoaa/issues
0 errors | 0 warnings | 0 notes
rorcid (0.3.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/rorcid/issues
0 errors | 0 warnings | 0 notes
rtide (0.0.3)
Maintainer: Joe Thorley joe@poissonconsulting.ca Bug reports: https://github.com/poissonconsulting/rtide/issues
0 errors | 0 warnings | 0 notes
sf (0.4-1)
Maintainer: Edzer Pebesma edzer.pebesma@uni-muenster.de Bug reports: https://github.com/edzer/sfr/issues/
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 10.2Mb
sub-directories of 1Mb or more:
doc 4.0Mb
libs 4.2Mb
sjmisc (2.3.1)
Maintainer: Daniel Lüdecke d.luedecke@uke.de Bug reports: https://github.com/sjPlot/sjmisc/issues
0 errors | 0 warnings | 0 notes
sjPlot (2.3.1)
Maintainer: Daniel Lüdecke d.luedecke@uke.de Bug reports: https://github.com/sjPlot/devel/issues
0 errors | 0 warnings | 0 notes
sjstats (0.9.0)
Maintainer: Daniel Lüdecke d.luedecke@uke.de Bug reports: https://github.com/sjPlot/sjstats/issues
0 errors | 0 warnings | 1 note
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘piecewiseSEM’
solrium (0.4.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: http://www.github.com/ropensci/solrium/issues
0 errors | 0 warnings | 0 notes
spbabel (0.4.5)
Maintainer: Michael D. Sumner mdsumner@gmail.com Bug reports: https://github.com/mdsumner/spbabel/issues
0 errors | 0 warnings | 0 notes
spdplyr (0.1.2)
Maintainer: Michael D. Sumner mdsumner@gmail.com Bug reports: https://github.com/mdsumner/spdplyr/issues
0 errors | 0 warnings | 0 notes
spocc (0.6.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/spocc/issues
0 errors | 0 warnings | 0 notes
srvyr (0.2.0)
Maintainer: Greg Freedman Ellis greg.freedman@gmail.com Bug reports: https://github.com/gergness/srvyr/issues
0 errors | 0 warnings | 0 notes
taxize (0.8.4)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/taxize/issues
0 errors | 0 warnings | 0 notes
tidyquant (0.4.0)
Maintainer: Matt Dancho mdancho@business-science.io Bug reports: https://github.com/mdancho84/tidyquant/issues
0 errors | 0 warnings | 0 notes
tidyr (0.6.1)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/tidyverse/tidyr/issues
0 errors | 0 warnings | 0 notes
tidyverse (1.1.1)
Maintainer: Hadley Wickham hadley@rstudio.com Bug reports: https://github.com/tidyverse/tidyverse/issues
0 errors | 0 warnings | 0 notes
units (0.4-3)
Maintainer: Edzer Pebesma edzer.pebesma@uni-muenster.de Bug reports: https://github.com/edzer/units/issues/
0 errors | 0 warnings | 0 notes
unpivotr (0.1.0)
Maintainer: Duncan Garmonsway nacnudus@gmail.com Bug reports: https://github.com/nacnudus/unpivotr/issues
0 errors | 0 warnings | 0 notes
valr (0.1.2)
Maintainer: Jay Hesselberth jay.hesselberth@gmail.com Bug reports: https://github.com/rnabioco/valr/issues
0 errors | 0 warnings | 1 note
checking installed package size ... NOTE
installed size is 12.5Mb
sub-directories of 1Mb or more:
libs 11.5Mb
wand (0.2.0)
Maintainer: Bob Rudis bob@rud.is Bug reports: https://github.com/hrbrmstr/wand/issues
0 errors | 0 warnings | 0 notes
worrms (0.1.0)
Maintainer: Scott Chamberlain myrmecocystus@gmail.com Bug reports: https://github.com/ropensci/worrms/issues
0 errors | 0 warnings | 0 notes
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