var_partitioning: Performing variation partitioning with p values

In RodolfoPelinson/AtlanticForestMetacommunity: Gives the functions and data for the Analysis of Pelinson et al. 2021 "Disentangling the multiple drivers of amphibian metacommunity structure in the Atlantic Forest at multiple spatial scales"

Performing variation partitioning with p values

Description

This function uses the varpart() function from vegan to compute all fractions and their respective p-values in a single table

Usage

var_partitioning(
  Y,
  env,
  clim = NULL,
  spa,
  percent_r2 = F,
  allow_negative_r2 = TRUE,
  round = 3
)

Arguments

Y	Species occurence matrix
env	Matrix of environmental variables
clim	Matrix of climate variables
spa	Matrix of spatial variables
percent_r2	Logical. Should the R2 values be converted in percentages?
allow_negative_r2	Logical. Should negative values be used to compute the R2 values?

RodolfoPelinson/AtlanticForestMetacommunity documentation built on Aug. 5, 2023, 3:53 p.m.