Description Usage Arguments Value
This function takes the raw data as input and find the MLE of the mixture model.
1 | SMIXnorm(dat, max_iter = 15, tol = 0.01, log_file)
|
dat |
input raw read count matrix. dim(dat)=J genes * I samples. |
max_iter |
maximum number of iterations for the nested EM algorithm default is 15, recommend range (10, 50). |
tol |
convergency criteria, default is 1e-2, recommend range (1e-5,1). |
log_file |
file name that records the log. |
A list conatins the MLE of all parameters.
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