An R Package for Unbiased Splicing Pathway Analysis in RNAseq data

Global functions | |
---|---|

color_scale | Source code |

compareResults | Man page Source code |

compareResults2 | Source code |

enrichmentMap | Man page Source code |

featureBasedData | Man page |

gene2cat | Source code |

gene2cat2 | Source code |

generateRankFeatureCount | Source code |

getGeneSet | Source code |

getGeneSetBySize | Source code |

getIdx | Source code |

getStaisitcs4Go | Source code |

gmtGene2Cat | Man page Source code |

gmtlist2file | Source code |

gsa.read.gmt | Source code |

list_to_df | Source code |

lrTestBias | Man page Source code |

makeFeatureTable | Source code |

makeGeneTable | Man page Source code |

match2Genome | Source code |

netplot | Source code |

nullpSplice | Source code |

onAttach | Source code |

onLoad | Source code |

outKegg2Gmt | Man page Source code |

outputCatBasedSelection | Source code |

outputGoBasedSelection | Source code |

overlap_ratio | Source code |

pathwaysplice | Source code |

plotPwfSplice | Source code |

pp | Source code |

reformatPathwayOut | Source code |

reformatdata | Source code |

reformatpath | Source code |

reversemapping | Source code |

runPathwaySplice | Man page Source code |

splitGeneCluster | Source code |

tuningRepcnt | Source code |

writeTibble | Source code |

writegototable | Source code |

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