Tools for Ecological Network Analysis

as.bipartite | Converts a network object (unipartite) to a two-mode... |

as.extended | Create an Extended Format Matrix |

bal | Balancing by Either Inputs or Outputs |

balance | Balance Flow Network Models |

bcratio | Calculates the Ratio of Positive to Negative Elements in a... |

bgcModels | Bigeochemical Cycling Models |

cycliv | Analysis of Feeding Cycles in a Network |

EcoNetWeb | Access example EcoNet models from the EcoNet website. |

eigenCentrality | the Eigen Centrality of a Network |

enaAll | Conduct All Major ENA |

enaAscendency | Calculates the Ascendency of an Ecological Network |

enaControl | Control Analyses of Ecological Networks |

enaCycle | Full Cycle Analysis of Ecological Networks |

enaEnviron | Ecological Network Environs |

enaFlow | Analyses of Ecological Networks |

enaModelInfo | Ecosystem Model Information |

enaModels | Ecosystem Models |

enaMTI | Mixed Trophic Impacts (MTI) Analysis |

enaR-package | Tools for Ecological Network Analysis (ena) |

enaStorage | Storage Analyses of Ecological Networks |

enaStructure | Structure Analyses of Ecological Network |

enaTroAgg | Trophic Aggregations (TroAgg) Analysis |

enaUncertainty | Produce a set of plausible network models |

enaUtility | Utility Analysis of Ecological Networks |

environCentrality | Environ Centrality an Ecological Network |

findPathLength | Cumulative Flow over a Range of Path Lengths |

force.balance | Repeated Application the Balance Function |

get.ns | Quick Calculation of a Range of Network Statistics. |

get.orient | Returns the global orientation |

meanTrophicLevel | meanTrophicLevel INPUT = network data object, min trophic... |

mExp | Calculate the exponent of a given matrix |

m.list | Sub-set of the Larger Ecosystem Models |

netOrder | Reorder Nodes in a Network in enaR |

oyster | Intertidal Oyster Reef Ecosystem Model |

pack | Compile Network Information into a Network Class |

plot.lindeman | plot.lindeman INPUT = network object OUTPUT = plot of the... |

read.EcoNet | Read an EcoNet model. |

read.enam | R function to read in a matrix formatted as Mdloti (Ursula... |

read.nea | Read an NEA formatted model into a network object |

read.scor | SCOR formatted file into R in multiple formats INPUT = file... |

read.wand | WAND formatted file into R |

relationalChange | Relational change compared between two matrices. |

scc | Find the strongly connected component |

scifix | scifix Corrects missing e or E in scientific notation |

set.orient | Globally reorients matrices |

ShannonDiversity | ShannonDiversity Shannon Diversity Metrics |

signs | Signs and summary of input matrix |

ssCheck | Checks if the given network is out of balance by a given... |

structure.statistics | structural statistics |

TES | Calculates the Total Environ Storage |

TET | Calculate the Total Environ Throughflow |

troModels | Trophic Models |

unpack | Extracts network object into a list |

write.EcoNet | Write enaR models to an EcoNet formatted file. |

write.nea | Create a formatted file with data arranged as expected input... |

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