imageSummaRy: imageSummaRy

In SFB-ELAINE/imageSummaRy: Summarizes (pixel) information of a given image

Description

Main function for image summary

Usage

imageSummaRy(input_file = NULL, input_directory = NULL,
  output_directory = NULL, threshold = 0)

Arguments

input_file	A character (image file)
input_directory	A character (directory of all images)
output_directory	A character (directory where the resulting images are to be saved)
threshold	A number (minimum intensity for counting pixles)

Details

Input should be tif-format. The output is the summary in the data frame format.

Author(s)

Kai Budde

Examples

## Not run: 
# Obtain all positions of cilia in every z-layer
df_image_information <- imageSummaRy(input_files = "inst/image.tif")

## End(Not run)

SFB-ELAINE/imageSummaRy documentation built on May 7, 2019, 10:44 p.m.