Plot_GO_node_name: Plot_GO

In SGDDNB/CLIPreg: Analyze and generate figures for enrichment of RBP targets and miRNA targets.

Plot_GO

Description

This function draws a network from CLIPreg output. Precise the number of RBP to consider with n the thershold for size of node you want the GO done with th. The number of GO term to show per node with GO_to_show

Usage

Plot_GO_node_name(
  rbp_lfc = rbp_lfc,
  res = res,
  Targets = Targets,
  gene_groups = gene_groups,
  n = 5,
  tpm_ribo = tpm_ribo,
  Nodes_to_keep = c(19, 15),
  GO_to_show = 3,
  forwarded = F
)

Arguments

symbol

SGDDNB/CLIPreg documentation built on Sept. 18, 2022, 9:42 a.m.