SONGDONGYUAN1994/PseudotimeDE: Inference of differential gene expression along cell pseudotime with well-calibrated p-values from single-cell RNA sequencing data

PseudotimeDE performs the differential expression (DE) analysis of genes along the pseudotime. Given a single cell RNA-seq data and a pseudotime inference method, pseudotimeDE returns the p-value of each gene.

Getting started

Package details

MaintainerDongyuan Song <dongyuansong@ucla.edu>
LicenseMIT + file LICENSE
Version0.99.0
URL https://github.com/SONGDONGYUAN1994/PseudotimeDE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("SONGDONGYUAN1994/PseudotimeDE")
SONGDONGYUAN1994/PseudotimeDE documentation built on Nov. 2, 2024, 7:55 p.m.