makeMatrix: makeMatrix
In SRenan/ImmuneSpaceData: A Data package for ImmuneSpace modules and reports
Description
Create a standard expression matrix from a given set of files or GEO
accession numbers.
Usage
1
makeMatrix(con, gef, isGEO = FALSE)
Arguments
con
An ImmuneSpaceConnection. The connection to the study that
is processed.
gef
A data.table. The gene_expression_files dataset, filtered
for the selected cohort and relvant files or accession numbers.
isGEO
A logical. Set to TRUE if the Matrix should be generated
from GEO accession numbers instead of data on disk.
SRenan/ImmuneSpaceData documentation built on May 9, 2019, 11:43 a.m.
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Description
Create a standard expression matrix from a given set of files or GEO accession numbers.
Usage
1 | makeMatrix(con, gef, isGEO = FALSE)
|
Arguments
con |
An |
gef |
A |
isGEO |
A |
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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