ggplot2-ggproto: Base ggproto classes for ggplot2

In SahaRahul/ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics

Description

If you are creating a new geom, stat, position, or scale in another package, you'll need to extend from ggplot2::Geom, ggplot2::Stat, ggplot2::Position, or ggplot2::Scale.

Geoms

All geom_* functions (like geom_point) return a layer that contains a Geom* object (like GeomPoint). The Geom* object is responsible for rendering the data in the plot.

Each of the Geom* objects is a ggproto() object, descended from the top-level Geom, and each implements various methods and fields. To create a new type of Geom object, you typically will want to implement one or more of the following:

Compared to Stat and Position, Geom is a little different because the execution of the setup and compute functions is split up. setup_data runs before position adjustments, and draw_layer is not run until render time, much later. This means there is no setup_params because it's hard to communicate the changes.

• Override either draw_panel(self, data, panel_params, coord) or draw_group(self, data, panel_params, coord). draw_panel is called once per panel, draw_group is called once per group.

  Use draw_panel if each row in the data represents a single element. Use draw_group if each group represents an element (e.g. a smooth, a violin).

  data is a data frame of scaled aesthetics.

  panel_params is a set of per-panel parameters for the coord. Generally, you should consider panel_params to be an opaque data structure that you pass along whenever you call a coord method.

  You must always call coord$transform(data, panel_params) to get the (position) scaled data for plotting. convert. To work with non-linear coordinate systems, you typically need to convert into a primitive geom (e.g. point, path or polygon), and then pass on to the corresponding draw method for munching.

  Must return a grob. Use zeroGrob() if there's nothing to draw.

• draw_key: Renders a single legend key.

• required_aes: A character vector of aesthetics needed to render the geom.

• default_aes: A list (generated by aes() of default values for aesthetics.

• reparameterise: Converts width and height to xmin and xmax, and ymin and ymax values. It can potentially set other values as well.

Coordinate systems

All coord_* functions (like coord_trans) return a Coord* object (like CoordTrans).

Each of the Coord* objects is a ggproto() object, descended from the top-level Coord. To create a new type of Coord object, you typically will want to implement one or more of the following:

• aspect: Returns the desired aspect ratio for the plot.

• labels: Returns a list containing labels for x and y.

• render_fg: Renders foreground elements.

• render_bg: Renders background elements.

• render_axis_h: Renders the horizontal axes.

• render_axis_v: Renders the vertical axes.

• range: Returns the x and y ranges

• transform: Transforms x and y coordinates.

• distance: Calculates distance.

• is_linear: Returns TRUE if the coordinate system is linear; FALSE otherwise.

• setup_panel_params(data):

• setup_data(data, params): Allows the coordinate system to manipulate the plot data. Should return list of data frames.

• setup_layout(layout, params): Allows the coordinate system to manipulate the layout data frame which assigns data to panels and scales.

Facets

All facet_* functions returns a Facet object or an object of a Facet subclass. This object describes how to assign data to different panels, how to apply positional scales and how to lay out the panels, once rendered.

Extending facets can range from the simple modifications of current facets, to very laborious rewrites with a lot of gtable() manipulation. For some examples of both, please see the extension vignette.

Facet subclasses, like other extendible ggproto classes, have a range of methods that can be modified. Some of these are required for all new subclasses, while other only need to be modified if need arises.

The required methods are:

• compute_layout: Based on layer data compute a mapping between panels, axes, and potentially other parameters such as faceting variable level etc. This method must return a data.frame containing at least the columns PANEL, SCALE_X, and SCALE_Y each containing integer keys mapping a PANEL to which axes it should use. In addition the data.frame can contain whatever other information is necessary to assign observations to the correct panel as well as determining the position of the panel.

• map_data: This method is supplied the data for each layer in turn and is expected to supply a PANEL column mapping each row to a panel defined in the layout. Additionally this method can also add or subtract data points as needed e.g. in the case of adding margins to facet_grid.

• draw_panels: This is where the panels are assembled into a gtable object. The method recieves, among others, a list of grobs defining the content of each panel as generated by the Geoms and Coord objects. The responsibility of the method is to decorate the panels with axes and strips as needed, as well as position them relative to each other in a gtable. For some of the automatic functions to work correctly, each panel, axis, and strip grob name must be prefixed with "panel", "axis", and "strip" respectively.

In addition to the methods described above, it is also possible to override the default behaviour of one or more of the following methods:

• setup_params:

• init_scales: Given a master scale for x and y, create panel specific scales for each panel defined in the layout. The default is to simply clone the master scale.

• train_scales: Based on layer data train each set of panel scales. The default is to train it on the data related to the panel.

• finish_data: Make last-minute modifications to layer data before it is rendered by the Geoms. The default is to not modify it.

• draw_back: Add a grob in between the background defined by the Coord object (usually the axis grid) and the layer stack. The default is to return an empty grob for each panel.

• draw_front: As above except the returned grob is placed between the layer stack and the foreground defined by the Coord object (usually empty). The default is, as above, to return an empty grob.

• draw_labels: Given the gtable returned by draw_panels, add axis titles to the gtable. The default is to add one title at each side depending on the position and existance of axes.

All extension methods recieve the content of the params field as the params argument, so the constructor function will generally put all relevant information into this field. The only exception is the shrink parameter which is used to determine if scales are retrained after Stat transformations has been applied.

Stats

All stat_* functions (like stat_bin) return a layer that contains a Stat* object (like StatBin). The Stat* object is responsible for rendering the data in the plot.

Each of the Stat* objects is a ggproto() object, descended from the top-level Stat, and each implements various methods and fields. To create a new type of Stat object, you typically will want to implement one or more of the following:

• Override one of : compute_layer(self, data, scales, ...), compute_panel(self, data, scales, ...), or compute_group(self, data, scales, ...).

  compute_layer() is called once per layer, compute_panel_() is called once per panel, and compute_group() is called once per group. All must return a data frame.

  It's usually best to start by overriding compute_group: if you find substantial performance optimisations, override higher up. You'll need to read the source code of the default methods to see what else you should be doing.

  data is a data frame containing the variables named according to the aesthetics that they're mapped to. scales is a list containing the x and y scales. There functions are called before the facets are trained, so they are global scales, not local to the individual panels.... contains the parameters returned by setup_params().

• finish_layer(data, params): called once for each layer. Used to modify the data after scales has been applied, but before the data is handed of to the geom for rendering. The default is to not modify the data. Use this hook if the stat needs access to the actual aesthetic values rather than the values that are mapped to the aesthetic.

• setup_params(data, params): called once for each layer. Used to setup defaults that need to complete dataset, and to inform the user of important choices. Should return list of parameters.

• setup_data(data, params): called once for each layer, after setp_params(). Should return modified data. Default methods removes all rows containing a missing value in required aesthetics (with a warning if !na.rm).

• required_aes: A character vector of aesthetics needed to render the geom.

• default_aes: A list (generated by aes() of default values for aesthetics.

Positions

All position_* functions (like position_dodge) return a Position* object (like PositionDodge). The Position* object is responsible for adjusting the position of overlapping geoms.

The way that the position_* functions work is slightly different from the geom_* and stat_* functions, because a position_* function actually "instantiates" the Position* object by creating a descendant, and returns that.

Each of the Position* objects is a ggproto() object, descended from the top-level Position, and each implements the following methods:

• compute_layer(self, data, params, panel) is called once per layer. panel is currently an internal data structure, so this method should not be overriden.

• compute_panel(self, data, params, panel) is called once per panel and should return a modified data frame.

  data is a data frame containing the variables named according to the aesthetics that they're mapped to. scales is a list containing the x and y scales. There functions are called before the facets are trained, so they are global scales, not local to the individual panels. params contains the parameters returned by setup_params().

• setup_params(data, params): called once for each layer. Used to setup defaults that need to complete dataset, and to inform the user of important choices. Should return list of parameters.

• setup_data(data, params): called once for each layer, after setp_params(). Should return modified data. Default checks that required aesthetics are present.

And the following fields

• required_aes: a character vector giving the aesthetics that must be present for this position adjustment to work.

Scales

All scale_* functions (like scale_x_continuous) return a Scale* object (like ScaleContinuous). The Scale* object represents a single scale.

Each of the Scale* objects is a ggproto() object, descended from the top-level Scale.

See Also

ggproto

SahaRahul/ggplot2 documentation built on May 17, 2019, 1:46 p.m.