SahakyanLab/Optimus: General purpose adaptive optimisation engine

This package is a general purpose optimisation engine. It supports i) Monte Carlo Optimisation with Metropolis Criterion and Acceptance Ratio Annealing on multiple cores, and ii) Acceptance Ratio Replica Exchange Monte Carlo Optimisation. In each case, the system pseudo-temperature is dynamically adjusted such that the observed acceptance ratio is kept near to the desired (fixed or changing) acceptance ratio.

Getting started

Package details

AuthorNicholas Andre G. Johnson [aut], Aleksandr B. Sahakyan [aut, cre]
MaintainerSahakyan Lab <[email protected]>
LicenseGPL-3
Version0.1.1
URL http://optimus.atgcdynamics.org http://github.com/SahakyanLab/Optimus
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("SahakyanLab/Optimus")
SahakyanLab/Optimus documentation built on Nov. 21, 2019, 11:24 a.m.