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DESCRIPTION
LICENSE.md
NAMESPACE
R/ancestor_code.R
R/multistate.R
R/utility.R
R/write_files.R
README.md
bayestraitr.Rproj
bayestraitr.Rproj.Rcheck/00check.log
build.R
function_logic
inst/CITATION
man/bt_addmodel.Rd
man/bt_addtag.Rd
man/bt_read.log.Rd
man/bt_read.schedule.Rd
man/bt_read.stones.Rd
man/bt_write.Rd
multistate_examples.sh
tests/testthat.R
tests/testthat/bayestraits_output/Artiodactyl.trees
tests/testthat/bayestraits_output/Artiodactyl.tsv
tests/testthat/bayestraits_output/Artiodactyl.txt
tests/testthat/bayestraits_output/Artiodactyl.txt.Log.txt
tests/testthat/bayestraits_output/Artiodactyl.txt.Schedule.txt
tests/testthat/bayestraits_output/Artiodactyl.txt.Stones.txt
tests/testthat/bayestraits_output/ArtiodactylMLIn.txt
tests/testthat/bayestraits_output/Bird.trees
tests/testthat/bayestraits_output/BirdHetCom.txt
tests/testthat/bayestraits_output/BirdTerritory.txt
tests/testthat/bayestraits_output/HarmonicMeanLh.txt
tests/testthat/bayestraits_output/MS_MCMC.Log.txt
tests/testthat/bayestraits_output/MS_MCMC.Schedule.txt
tests/testthat/bayestraits_output/MS_MCMC_wF.Log.txt
tests/testthat/bayestraits_output/MS_MCMC_wF.Schedule.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS.Log.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS.Schedule.txt
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tests/testthat/bayestraits_output/MS_MCMC_wSS_wMRCA.Log.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS_wMRCA.Schedule.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS_wPR.Log.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS_wPR.Schedule.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS_wPR.Stones.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS_wTag.Log.txt
tests/testthat/bayestraits_output/MS_MCMC_wSS_wTag.Schedule.txt
tests/testthat/bayestraits_output/MS_ML.Log.txt
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tests/testthat/bayestraits_output/MammalBrainBodyGt.txt
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tests/testthat/bayestraits_output/MammalBrainBodyPredTapir.txt
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tests/testthat/bayestraits_output/MammalModelB.txt
tests/testthat/bayestraits_output/Marsupials.trees
tests/testthat/bayestraits_output/Marsupials.txt
tests/testthat/bayestraits_output/MarsupialsLTCom.txt
tests/testthat/bayestraits_output/NortheastBantu.trees
tests/testthat/bayestraits_output/NortheastBantu.txt
tests/testthat/bayestraits_output/Primates.trees
tests/testthat/bayestraits_output/Primates.txt
tests/testthat/test_ancestor.R
tests/testthat/test_misc.R
tests/testthat/test_multistate.R
tests/testthat/test_read.R
tests/testthat/test_stones.R
tests/testthat/test_write.R