fetch_data_file: Download data file

Description Usage Arguments Value Examples

View source: R/BNrich.R

Description

Download necessary data file to start BNrich

Usage

1
fetch_data_file(destfile, verbose = FALSE)

Arguments

destfile

A directory in user's own computer for save preprocessed data file

verbose

A logical argument to show verbose results

Value

A list contain mapkG, PathName_final and pathway.id. The mapkG is a list contains imported 187 preprocessed signaling pathways, PathName_final is a data.frame includes names and IDs of all 187 pathways and pathway.id is a character vector of pathways IDs

Examples

1
2
3
destfile = tempfile("files", fileext = ".rda")
files <- fetch_data_file()
load(destfile)

Samaneh-Bioinformatics/BNrich documentation built on April 6, 2020, 4:17 a.m.